Detailed information of oriT
oriT
The information of the oriT region
| oriTDB ID | 120393 |
| Name | oriT_p11A1213097B_A_KPC  |
| Organism | Enterobacter cloacae subsp. cloacae strain 11A1213CRGN097B |
| Sequence Completeness | - |
| NCBI accession of oriT (coordinates [strand]) | NZ_OQ821059 (34400..34494 [+], 95 nt) |
| oriT length | 95 nt |
| IRs (inverted repeats) | 73..78, 85..90 (AAAAAA..TTTTTT) 73..78, 84..89 (AAAAAA..TTTTTT) 27..34, 37..44 (AGCGTGAT..ATCACGCT) 13..19, 31..37 (TAAATCA..TGATTTA) |
| Location of nic site | 55..56 |
| Conserved sequence flanking the nic site |
GGTGTATAGC |
| Note | Predicted by oriTfinder 2.0 |
oriT sequence
Download Length: 95 nt
>oriT_p11A1213097B_A_KPC
TTTTTTTTCTTTTAAATCAGTGAGATAGCGTGATTTATCACGCTGCGTTAGGTGTATAGCAGGTTAAGGGATAAAAAATCATCTTTTTTTGGTAG
TTTTTTTTCTTTTAAATCAGTGAGATAGCGTGATTTATCACGCTGCGTTAGGTGTATAGCAGGTTAAGGGATAAAAAATCATCTTTTTTTGGTAG
Visualization of oriT structure
oriT secondary structure
Predicted by RNAfold.
Download structure file
Host bacterium
| ID | 20822 | GenBank | NZ_OQ821059 |
| Plasmid name | p11A1213097B_A_KPC | Incompatibility group | IncFIA |
| Plasmid size | 90910 bp | Coordinate of oriT [Strand] | 34400..34494 [+] |
| Host baterium | Enterobacter cloacae subsp. cloacae strain 11A1213CRGN097B |
Cargo genes
| Drug resistance gene | blaKPC-4, blaTEM-1A, aph(3')-Ia, mph(A), sul1, qacE, aac(3)-Ib, aac(6')-Ib-cr, blaOXA-1, catB3, ARR-3 |
| Virulence gene | - |
| Metal resistance gene | - |
| Degradation gene | - |
| Symbiosis gene | - |
| Anti-CRISPR | - |