Detailed information of oriT
oriT
The information of the oriT region
| oriTDB ID | 120375 |
| Name | oriT_PC08|unnamed2  |
| Organism | Kosakonia cowanii strain PC08 |
| Sequence Completeness | - |
| NCBI accession of oriT (coordinates [strand]) | NZ_CP121171 (1608..1667 [+], 60 nt) |
| oriT length | 60 nt |
| IRs (inverted repeats) | _ |
| Location of nic site | _ |
| Conserved sequence flanking the nic site |
_ |
| Note | Predicted by oriTfinder 2.0 |
oriT sequence
Download Length: 60 nt
>oriT_PC08|unnamed2
GGGTTTCGGGGCGCAGCCCTGAACCAGTCACGTAGCGCTAGCGGAGTGTATACTGGCTTA
GGGTTTCGGGGCGCAGCCCTGAACCAGTCACGTAGCGCTAGCGGAGTGTATACTGGCTTA
Visualization of oriT structure
oriT secondary structure
Predicted by RNAfold.
Download structure file
Host bacterium
| ID | 20804 | GenBank | NZ_CP121171 |
| Plasmid name | PC08|unnamed2 | Incompatibility group | Col440II |
| Plasmid size | 5842 bp | Coordinate of oriT [Strand] | 1608..1667 [+] |
| Host baterium | Kosakonia cowanii strain PC08 |
Cargo genes
| Drug resistance gene | - |
| Virulence gene | - |
| Metal resistance gene | - |
| Degradation gene | - |
| Symbiosis gene | - |
| Anti-CRISPR | - |