Detailed information of oriT

oriT

The information of the oriT region

• oriTDB ID: 119673
• Name: oriT_FJAT-54423|unnamed1
• Organism: Brevibacillus composti strain FJAT-54423
• Sequence Completeness: -
• NCBI accession of oriT (coordinates [strand]): NZ_CP066309 (8702..8734 [-], 33 nt)
• oriT length: 33 nt
• IRs (inverted repeats): _
• Location of nic site: _
• Conserved sequence flanking the nic site: _
• Note: Predicted by oriTfinder 2.0

oriT sequence

• Length: 33 nt

>oriT_FJAT-54423|unnamed1
ATGCGAAGGGCGCACTTATACATCGCTGCGCGA

oriT secondary structure

Predicted by RNAfold.

Relaxase

mobQ_JD108_RS22150_FJAT-54423|unnamed1

• ID: 12433
• GenBank: WP_198830245
• Name: mobQ_JD108_RS22150_FJAT-54423|unnamed1
• UniProt ID: _
• Length: 511 a.a.
• Note: Predicted by oriTfinder 2.0

Relaxase protein sequence

• Length: 511 a.a.
• Molecular weight: 58878.42 Da
• Isoelectric Point: 10.0427

>WP_198830245.1 MobQ family relaxase [Brevibacillus composti]
MAIYHFSVQVISRSQGRSAVAAAAYRAGERLQDERYGHTYDYTKKNVAERAIAAPENAPAWVKDREQLWN
AVEAAEKRKDAQLCREINIALPRELTALQQRELVSTFVTEQFVKRGMIADVAIHRDNPENPHAHIMLTMR
EITPAGFGQKVREWNDKGLLEAWRAEWANYANRALERAGSQERIDHRSLEAQGSDRLPTVHEGPHVRQME
SRGIRTDRGDLNRAVAEYNGLVVSLAAYRREKDALVKETAPRANVAPVESSQKQVAVLIAKGKEIKEQIG
RIDADLNRIEERLRYYNEQQQRISDRVRLEKQLSDMQQQGRSFFGLYNKNSKDIAELTRKIERLGERIQE
HGRFAPSDQEAVELQAQQKQLEQTKRELSGQFFAVRNKVEQLKAGQEKIETKTVTATLRQVILHLKDKAT
GVPVRYVEDDLDKQVEKARFTNRGGVEQLHYRLQDGTERNVLFQNLHMTSQQRDSIFDMIGAAIKGVERA
QQRDEADRQRQMKKKRRGMER

Protein domains

Predicted by InterproScan.

• MobA/MobL family (MobA_MobL) (17-212)

Protein structure

No available structure.

Host bacterium

• ID: 20103
• GenBank: NZ_CP066309
• Plasmid name: FJAT-54423|unnamed1
• Incompatibility group: -
• Plasmid size: 10631 bp
• Coordinate of oriT [Strand]: 8702..8734 [-]
• Host baterium: Brevibacillus composti strain FJAT-54423

Cargo genes

• Drug resistance gene: -
• Virulence gene: -
• Metal resistance gene: -
• Degradation gene: -
• Symbiosis gene: -
• Anti-CRISPR: -