Detailed information of oriT
oriT
The information of the oriT region
| oriTDB ID | 119223 |
| Name | oriT_FDAARGOS_430|unnamed  |
| Organism | Raoultella planticola strain FDAARGOS_430 |
| Sequence Completeness | - |
| NCBI accession of oriT (coordinates [strand]) | NZ_CP023882 (125..182 [+], 58 nt) |
| oriT length | 58 nt |
| IRs (inverted repeats) | _ |
| Location of nic site | _ |
| Conserved sequence flanking the nic site |
_ |
| Note | Predicted by oriTfinder 2.0 |
oriT sequence
Download Length: 58 nt
>oriT_FDAARGOS_430|unnamed
GGGTTTCGGGGCGCAGCCCTGAACCAGTCACGTAGCGCTAGCGGAGTGTATACTGGCT
GGGTTTCGGGGCGCAGCCCTGAACCAGTCACGTAGCGCTAGCGGAGTGTATACTGGCT
Visualization of oriT structure
oriT secondary structure
Predicted by RNAfold.
Download structure file
Host bacterium
| ID | 19653 | GenBank | NZ_CP023882 |
| Plasmid name | FDAARGOS_430|unnamed | Incompatibility group | ColRNAI |
| Plasmid size | 2481 bp | Coordinate of oriT [Strand] | 125..182 [+] |
| Host baterium | Raoultella planticola strain FDAARGOS_430 |
Cargo genes
| Drug resistance gene | - |
| Virulence gene | - |
| Metal resistance gene | - |
| Degradation gene | - |
| Symbiosis gene | - |
| Anti-CRISPR | - |