Detailed information of oriT

oriT


The information of the oriT region


oriTDB ID   118284
Name   oriT_FDAARGOS_1138|unnamed1 in_silico
Organism   Serratia plymuthica strain FDAARGOS_1138
Sequence Completeness      -
NCBI accession of oriT (coordinates [strand])   NZ_CP068097 (1710..1767 [+], 58 nt)
oriT length   58 nt
IRs (inverted repeats)     _
Location of nic site      _
Conserved sequence flanking the
  nic site  
 
 _
Note   Predicted by oriTfinder 2.0

  oriT sequence  


Download         Length: 58 nt

>oriT_FDAARGOS_1138|unnamed1
GGGTTTCGGAGCGCAGCACTGAACCAGTCACGTAGCGCTAGCGGAGTGTACAGTGGCT

Visualization of oriT structure

  oriT secondary structure

Predicted by RNAfold.

Download structure file


Host bacterium


ID   18717 GenBank   NZ_CP068097
Plasmid name   FDAARGOS_1138|unnamed1 Incompatibility group   ColRNAI
Plasmid size   5519 bp Coordinate of oriT [Strand]   1710..1767 [+]
Host baterium   Serratia plymuthica strain FDAARGOS_1138

Cargo genes


Drug resistance gene   -
Virulence gene   -
Metal resistance gene   -
Degradation gene   -
Symbiosis gene   -
Anti-CRISPR   -