Detailed information of oriT

oriT

The information of the oriT region

• oriTDB ID: 117899
• Name: oriT_pSFxv_3
• Organism: Shigella flexneri 2002017
• Sequence Completeness: -
• NCBI accession of oriT (coordinates [strand]): NC_017329 (714..773 [-], 60 nt)
• oriT length: 60 nt
• IRs (inverted repeats): _
• Location of nic site: _
• Conserved sequence flanking the nic site: _
• Note: Predicted by oriTfinder 2.0

oriT sequence

• Length: 60 nt

>oriT_pSFxv_3
GGGTTTCGGGGCGCAGCCCTGAACCAGTCATGTAGCGCTAGCGGAGTGTATACTGGCTTA

oriT secondary structure

Predicted by RNAfold.

Host bacterium

• ID: 18332
• GenBank: NC_017329
• Plasmid name: pSFxv_3
• Incompatibility group: ColRNAI
• Plasmid size: 6200 bp
• Coordinate of oriT [Strand]: 714..773 [-]
• Host baterium: Shigella flexneri 2002017

Cargo genes

• Drug resistance gene: aph(6)-Id, aph(3'')-Ib, sul2
• Virulence gene: -
• Metal resistance gene: -
• Degradation gene: -
• Symbiosis gene: -
• Anti-CRISPR: -