Detailed information of oriT
oriT
The information of the oriT region
oriTDB ID | 117870 |
Name | oriT_pWP3-S18-ESBL-05_6 |
Organism | Klebsiella sp. WP3-S18-ESBL-05 |
Sequence Completeness | - |
NCBI accession of oriT (coordinates [strand]) | NZ_AP022026 (3497..3556 [+], 60 nt) |
oriT length | 60 nt |
IRs (inverted repeats) | _ |
Location of nic site | _ |
Conserved sequence flanking the nic site |
_ |
Note | Predicted by oriTfinder 2.0 |
oriT sequence
Download Length: 60 nt
>oriT_pWP3-S18-ESBL-05_6
GGGTTTCGGGGCGCAGCCCTGAACCAGTCACGTAGCGCTAGCGGAGTGTATACTGGCTTA
GGGTTTCGGGGCGCAGCCCTGAACCAGTCACGTAGCGCTAGCGGAGTGTATACTGGCTTA
Visualization of oriT structure
oriT secondary structure
Predicted by RNAfold.
Download structure fileHost bacterium
ID | 18303 | GenBank | NZ_AP022026 |
Plasmid name | pWP3-S18-ESBL-05_6 | Incompatibility group | Col440II |
Plasmid size | 4616 bp | Coordinate of oriT [Strand] | 3497..3556 [+] |
Host baterium | Klebsiella sp. WP3-S18-ESBL-05 |
Cargo genes
Drug resistance gene | - |
Virulence gene | - |
Metal resistance gene | - |
Degradation gene | - |
Symbiosis gene | - |
Anti-CRISPR | - |