Detailed information of oriT

oriT


The information of the oriT region


oriTDB ID   117573
Name   oriT_pWP3-S18-CRE-02_7 in_silico
Organism   Klebsiella quasipneumoniae strain WP3-S18-CRE-02
Sequence Completeness      -
NCBI accession of oriT (coordinates [strand])   NZ_AP022011 (586..637 [-], 52 nt)
oriT length   52 nt
IRs (inverted repeats)      7..14, 17..24  (GCAAAATT..AATTTTGC)
Location of nic site      _
Conserved sequence flanking the
  nic site  
 
 _
Note   Predicted by oriTfinder 2.0

  oriT sequence  


Download         Length: 52 nt

>oriT_pWP3-S18-CRE-02_7
AAATCTGCAAAATTTTAATTTTGCGTAGTGTGTGGGTATTTTTAGTGGTGAG

Visualization of oriT structure

  oriT secondary structure

Predicted by RNAfold.

Download structure file


Host bacterium


ID   18006 GenBank   NZ_AP022011
Plasmid name   pWP3-S18-CRE-02_7 Incompatibility group   -
Plasmid size   4937 bp Coordinate of oriT [Strand]   586..637 [-]
Host baterium   Klebsiella quasipneumoniae strain WP3-S18-CRE-02

Cargo genes


Drug resistance gene   -
Virulence gene   -
Metal resistance gene   -
Degradation gene   -
Symbiosis gene   -
Anti-CRISPR   -