Detailed information of oriT
oriT
The information of the oriT region
| oriTDB ID | 117296 |
| Name | oriT_pACESH0366-5  |
| Organism | Klebsiella quasipneumoniae subsp. similipneumoniae strain ACESH00366hy |
| Sequence Completeness | - |
| NCBI accession of oriT (coordinates [strand]) | NZ_CP138838 (1734..1785 [-], 52 nt) |
| oriT length | 52 nt |
| IRs (inverted repeats) | 7..14, 17..24 (GCAAAATT..AATTTTGC) |
| Location of nic site | _ |
| Conserved sequence flanking the nic site |
_ |
| Note | Predicted by oriTfinder 2.0 |
oriT sequence
Download Length: 52 nt
>oriT_pACESH0366-5
AAATCTGCAAAATTTTAATTTTGCGTAGTGTGTGGGTATTTTTAGTGGTGAG
AAATCTGCAAAATTTTAATTTTGCGTAGTGTGTGGGTATTTTTAGTGGTGAG
Visualization of oriT structure
oriT secondary structure
Predicted by RNAfold.
Download structure file
Host bacterium
| ID | 17729 | GenBank | NZ_CP138838 |
| Plasmid name | pACESH0366-5 | Incompatibility group | - |
| Plasmid size | 2299 bp | Coordinate of oriT [Strand] | 1734..1785 [-] |
| Host baterium | Klebsiella quasipneumoniae subsp. similipneumoniae strain ACESH00366hy |
Cargo genes
| Drug resistance gene | - |
| Virulence gene | - |
| Metal resistance gene | - |
| Degradation gene | - |
| Symbiosis gene | - |
| Anti-CRISPR | - |