Detailed information of oriT
oriT
The information of the oriT region
| oriTDB ID | 116731 |
| Name | oriT_NW56|unnamed2  |
| Organism | Yersinia enterocolitica strain NW56 |
| Sequence Completeness | - |
| NCBI accession of oriT (coordinates [strand]) | NZ_CP107104 (467..524 [+], 58 nt) |
| oriT length | 58 nt |
| IRs (inverted repeats) | _ |
| Location of nic site | _ |
| Conserved sequence flanking the nic site |
_ |
| Note | Predicted by oriTfinder 2.0 |
oriT sequence
Download Length: 58 nt
>oriT_NW56|unnamed2
GGGTTTCGGGGCGCAGCCCTGAACCAGTCACGTAGCGCTAGCGGAGTGTATACTGGCT
GGGTTTCGGGGCGCAGCCCTGAACCAGTCACGTAGCGCTAGCGGAGTGTATACTGGCT
Visualization of oriT structure
oriT secondary structure
Predicted by RNAfold.
Download structure file
Host bacterium
| ID | 17164 | GenBank | NZ_CP107104 |
| Plasmid name | NW56|unnamed2 | Incompatibility group | Col440II |
| Plasmid size | 3300 bp | Coordinate of oriT [Strand] | 467..524 [+] |
| Host baterium | Yersinia enterocolitica strain NW56 |
Cargo genes
| Drug resistance gene | - |
| Virulence gene | - |
| Metal resistance gene | - |
| Degradation gene | - |
| Symbiosis gene | - |
| Anti-CRISPR | - |