Detailed information of oriT
oriT
The information of the oriT region
| oriTDB ID | 116270 |
| Name | oriT_ES-1276|unnamed4  |
| Organism | Enterococcus faecalis strain ES-1276 |
| Sequence Completeness | - |
| NCBI accession of oriT (coordinates [strand]) | NZ_CP136350 (3682..3731 [+], 50 nt) |
| oriT length | 50 nt |
| IRs (inverted repeats) | _ |
| Location of nic site | _ |
| Conserved sequence flanking the nic site |
_ |
| Note | Predicted by oriTfinder 2.0 |
oriT sequence
Download Length: 50 nt
>oriT_ES-1276|unnamed4
AATATCGCAACATGCTAGCATATTGCTCTGCTCGCAAAAAGAAAGCCTAC
AATATCGCAACATGCTAGCATATTGCTCTGCTCGCAAAAAGAAAGCCTAC
Visualization of oriT structure
oriT secondary structure
Predicted by RNAfold.
Download structure file
Relaxase
| ID | 10406 | GenBank | WP_172503054 |
| Name | mobV_RX139_RS15375_ES-1276|unnamed4 |
UniProt ID | _ |
| Length | 559 a.a. | PDB ID | |
| Note | Predicted by oriTfinder 2.0 | ||
Relaxase protein sequence
Download Length: 559 a.a. Molecular weight: 65031.61 Da Isoelectric Point: 8.8302
>WP_172503054.1 MobV family relaxase [Enterococcus faecalis]
MSKIVARMEKMKVGNLSGIQRHNQRETDNHSNPDIDIEKSHLNYDLVNPGSINYREKIKQIIESQRISKR
AVRKDAVLVNEWIITSDTAFFQENTDTQAFFTDVVAYFSDRCGRQNVAYATVHLDETTPHMHLGIVPMYE
GRLSSKQVFSRQSLLEIQEELPNYLKERGYAIERGLRGSPQKHLSVKEYKDVQKELQVSKQELANQEQIL
AEKERELHSYEQAIFRIDRLLEEKNEEVKGKVQAMNQLEAKRNEIINSLQTTVLPDLANVKEKKFSLNGL
KYVLSASDLSAIKSITKDFETLRTQNKHLKIDNNTLTQENKELKQVNHVQELQITDLTHELTLKKEQLTA
FEEKQLNYDQSEQIKQELDKTTQKVSVLETDNKRLKDKITDLTYDFSELNEKYQEIKLKFDGLTTYLHER
LGQAKETILFTIQQGVKYLQNAPKLKKSLERYSKDRTYLIDEKGTLFLPPDTGSKGVTMSLNPHFYPLKA
PFYNRETGCYEFVGEYMANGRSRTNTLQLSEEQVLEKKAFTFEQSTDKKAWQQSKKYSRDMSKGRGLSR
MSKIVARMEKMKVGNLSGIQRHNQRETDNHSNPDIDIEKSHLNYDLVNPGSINYREKIKQIIESQRISKR
AVRKDAVLVNEWIITSDTAFFQENTDTQAFFTDVVAYFSDRCGRQNVAYATVHLDETTPHMHLGIVPMYE
GRLSSKQVFSRQSLLEIQEELPNYLKERGYAIERGLRGSPQKHLSVKEYKDVQKELQVSKQELANQEQIL
AEKERELHSYEQAIFRIDRLLEEKNEEVKGKVQAMNQLEAKRNEIINSLQTTVLPDLANVKEKKFSLNGL
KYVLSASDLSAIKSITKDFETLRTQNKHLKIDNNTLTQENKELKQVNHVQELQITDLTHELTLKKEQLTA
FEEKQLNYDQSEQIKQELDKTTQKVSVLETDNKRLKDKITDLTYDFSELNEKYQEIKLKFDGLTTYLHER
LGQAKETILFTIQQGVKYLQNAPKLKKSLERYSKDRTYLIDEKGTLFLPPDTGSKGVTMSLNPHFYPLKA
PFYNRETGCYEFVGEYMANGRSRTNTLQLSEEQVLEKKAFTFEQSTDKKAWQQSKKYSRDMSKGRGLSR
Protein domains
Predicted by InterproScan.
Protein structure
No available structure.
Host bacterium
| ID | 16703 | GenBank | NZ_CP136350 |
| Plasmid name | ES-1276|unnamed4 | Incompatibility group | - |
| Plasmid size | 5129 bp | Coordinate of oriT [Strand] | 3682..3731 [+] |
| Host baterium | Enterococcus faecalis strain ES-1276 |
Cargo genes
| Drug resistance gene | - |
| Virulence gene | - |
| Metal resistance gene | - |
| Degradation gene | - |
| Symbiosis gene | - |
| Anti-CRISPR | - |