Detailed information of oriT

oriT

The information of the oriT region

• oriTDB ID: 116268
• Name: oriT_ES-397|unnamed4
• Organism: Enterococcus faecalis strain ES-397
• Sequence Completeness: -
• NCBI accession of oriT (coordinates [strand]): NZ_CP136345 (2264..2313 [-], 50 nt)
• oriT length: 50 nt
• IRs (inverted repeats): _
• Location of nic site: _
• Conserved sequence flanking the nic site: _
• Note: Predicted by oriTfinder 2.0

oriT sequence

• Length: 50 nt

>oriT_ES-397|unnamed4
AATATCGCAACATGCTAGCATATTGCTCTGCTCGCAAAAAGAAAGCCTAC

oriT secondary structure

Predicted by RNAfold.

Relaxase

mobV_RX142_RS16265_ES-397|unnamed4

• ID: 10404
• GenBank: WP_172503054
• Name: mobV_RX142_RS16265_ES-397|unnamed4
• UniProt ID: _
• Length: 559 a.a.
• Note: Predicted by oriTfinder 2.0

Relaxase protein sequence

• Length: 559 a.a.
• Molecular weight: 65031.61 Da
• Isoelectric Point: 8.8302

>WP_172503054.1 MobV family relaxase [Enterococcus faecalis]
MSKIVARMEKMKVGNLSGIQRHNQRETDNHSNPDIDIEKSHLNYDLVNPGSINYREKIKQIIESQRISKR
AVRKDAVLVNEWIITSDTAFFQENTDTQAFFTDVVAYFSDRCGRQNVAYATVHLDETTPHMHLGIVPMYE
GRLSSKQVFSRQSLLEIQEELPNYLKERGYAIERGLRGSPQKHLSVKEYKDVQKELQVSKQELANQEQIL
AEKERELHSYEQAIFRIDRLLEEKNEEVKGKVQAMNQLEAKRNEIINSLQTTVLPDLANVKEKKFSLNGL
KYVLSASDLSAIKSITKDFETLRTQNKHLKIDNNTLTQENKELKQVNHVQELQITDLTHELTLKKEQLTA
FEEKQLNYDQSEQIKQELDKTTQKVSVLETDNKRLKDKITDLTYDFSELNEKYQEIKLKFDGLTTYLHER
LGQAKETILFTIQQGVKYLQNAPKLKKSLERYSKDRTYLIDEKGTLFLPPDTGSKGVTMSLNPHFYPLKA
PFYNRETGCYEFVGEYMANGRSRTNTLQLSEEQVLEKKAFTFEQSTDKKAWQQSKKYSRDMSKGRGLSR

Protein domains

Predicted by InterproScan.

• Plasmid recombination enzyme (Mob_Pre) (2-191)

Protein structure

No available structure.

Host bacterium

• ID: 16701
• GenBank: NZ_CP136345
• Plasmid name: ES-397|unnamed4
• Incompatibility group: -
• Plasmid size: 5107 bp
• Coordinate of oriT [Strand]: 2264..2313 [-]
• Host baterium: Enterococcus faecalis strain ES-397

Cargo genes

• Drug resistance gene: -
• Virulence gene: -
• Metal resistance gene: -
• Degradation gene: -
• Symbiosis gene: -
• Anti-CRISPR: -