Detailed information of oriT

oriT

The information of the oriT region


oriTDB ID   116119
Name   oriT_2022CK-00409|unnamed3 in_silico
Organism   Enterobacter cloacae strain 2022CK-00409
Sequence Completeness      -
NCBI accession of oriT (coordinates [strand])   NZ_CP104839 (1070..1114 [-], 45 nt)
oriT length   45 nt
IRs (inverted repeats)      7..13, 25..31  (CGTTTCT..AGAAACG)
Location of nic site      _
Conserved sequence flanking the
  nic site    		  _
Note   Predicted by oriTfinder 2.0

  oriT sequence  


Download         Length: 45 nt

>oriT_2022CK-00409|unnamed3
GCGCACCGTTTCTGAACGAAGTGAAGAAACGTCTAAGTGCGCCCT

Visualization of oriT structure

  oriT secondary structure

Predicted by RNAfold.

Download structure file


Relaxase

ID   10306 GenBank   WP_261659445
Name   mobA_N7S94_RS25655_2022CK-00409|unnamed3 insolico UniProt ID   _
Length   365 a.a. PDB ID   
Note   Predicted by oriTfinder 2.0

  Relaxase protein sequence


Download         Length: 365 a.a.        Molecular weight: 42230.70 Da        Isoelectric Point: 6.3344

>WP_261659445.1 mobilization protein MobA [Enterobacter cloacae]
MASYHLSVKNGGKGSASPHADYISREGKYAREKDSDLEHKESGNMPAWAAHKPTEFWKAADTFERANGCT
YREIEIALPRELKPEQRLELVRDFVRQEIGDRHAYQFAIHNPKAAIAGGEQPHAHIMFSERMNDGIDRDP
QQYFKRANSKAPERGGAKKARFGETPTERKEHLVAQRERWADLQNKHLERYQHTDRVDARSLKAQGIERE
PERHLGAGQVQRFDTAQLQAILERRDAERQAEQSRDERDSVIDVTTSLREAISERDNLTIKQEQKPEPAQ
EDTSGRVFDFEKEPEKLNALVSDALKDVQDEIDLQSLVNETMAEFQGIHQEMERLAEKQRQQEKEQQRLA
EQTRQKPDKGWSFSR

  Protein domains


Predicted by InterproScan.

MobA/MobL family (MobA_MobL)

(42-218)


  Protein structure



No available structure.




Host bacterium

ID   16552 GenBank   NZ_CP104839
Plasmid name   2022CK-00409|unnamed3 Incompatibility group   ColE10
Plasmid size   10802 bp Coordinate of oriT [Strand]   1070..1114 [-]
Host baterium   Enterobacter cloacae strain 2022CK-00409

Cargo genes

Drug resistance gene   mcr-4.3
Virulence gene   -
Metal resistance gene   -
Degradation gene   -
Symbiosis gene   -
Anti-CRISPR   -