Detailed information of oriT

oriT


The information of the oriT region


oriTDB ID   115919
Name   oriT_pMQB_Silv108.4 in_silico
Organism   Raoultella ornithinolytica strain MQB_Silv_108
Sequence Completeness      -
NCBI accession of oriT (coordinates [strand])   NZ_CP104460 (434..493 [-], 60 nt)
oriT length   60 nt
IRs (inverted repeats)     _
Location of nic site      _
Conserved sequence flanking the
  nic site  
 
 _
Note   Predicted by oriTfinder 2.0

  oriT sequence  


Download         Length: 60 nt

>oriT_pMQB_Silv108.4
GGGTTTCGGGGCGCAGCCCTGAACCAGTCACGTAGCGCTAGCGGAGTGTATACTGGCTTA

Visualization of oriT structure

  oriT secondary structure

Predicted by RNAfold.

Download structure file


Host bacterium


ID   16352 GenBank   NZ_CP104460
Plasmid name   pMQB_Silv108.4 Incompatibility group   Col440II
Plasmid size   4665 bp Coordinate of oriT [Strand]   434..493 [-]
Host baterium   Raoultella ornithinolytica strain MQB_Silv_108

Cargo genes


Drug resistance gene   -
Virulence gene   -
Metal resistance gene   -
Degradation gene   -
Symbiosis gene   -
Anti-CRISPR   -