Detailed information of oriT
oriT
The information of the oriT region
| oriTDB ID | 115436 |
| Name | oriT_pSsal-NU10  |
| Organism | Streptococcus salivarius strain NU10 |
| Sequence Completeness | - |
| NCBI accession of oriT (coordinates [strand]) | NZ_MN480762 (166559..166613 [-], 55 nt) |
| oriT length | 55 nt |
| IRs (inverted repeats) | 1..7, 9..15 (GTTGATA..TATCAAC) |
| Location of nic site | _ |
| Conserved sequence flanking the nic site |
_ |
| Note | Predicted by oriTfinder 2.0 |
oriT sequence
Download Length: 55 nt
>oriT_pSsal-NU10
GTTGATACTATCAACTTACTGAGGAACGAAGGGACAGTTTTCCTTATGCTCTTTT
GTTGATACTATCAACTTACTGAGGAACGAAGGGACAGTTTTCCTTATGCTCTTTT
Visualization of oriT structure
oriT secondary structure
Predicted by RNAfold.
Download structure file
T4CP
| ID | 11520 | GenBank | WP_258557480 |
| Name | t4cp2_H5E73_RS00195_pSsal-NU10 |
UniProt ID | _ |
| Length | 1012 a.a. | PDB ID | _ |
| Note | Predicted by oriTfinder 2.0 | ||
T4CP protein sequence
Download Length: 1012 a.a. Molecular weight: 116374.67 Da Isoelectric Point: 4.9535
>WP_258557480.1 hypothetical protein [Streptococcus salivarius]
MRKILKLFFNRYYTNGKRTIDILLYCWRKYIDWLYHISFGLFAFNIIMFIFRWRLPNWVFISLFIFLFVN
MALVLYIGVWHSNVTSRQIFVLFEKYDTLKRAERKKIIGKYAIRAALAAVFISSGLYVLTINNFILSLIN
RMYDVADNYLKYMPWSIPNGSQTGIVLSYHTLKPLIGADWFNSLLLLTPIGAIGLIFYNSYATGIAEKTY
EKLVGQWLGGRYFQDSVLSNIVHNQDEKGQANLVMGLNSKTGEQVILHANERTYHTIIFGLIGTGKSATI
LIPAMLQDMENMKYYLLSYRKYLMKVDEELEQEFFSTEFERKKKRRELLEQWYNNGYAAELTNGIYMTEP
SGSMYGTIVKYAHKMGFPDEMIWTLDPTNPGTGAINILDGDTTQVKGAVRDLFKRFSDPSGTGSSFFLNQ
EGQLTDNIITVIKEVALIPDAPINYMLKGKSPTLTEFSNMLRSSDWIEAYIAVFEQLLNRKKRLFEETLK
KHEEFLAQEKEKWLEESEYNREHEQLFDTILRPENVHEAINAFNDERNKLENLQSSYDYFINAHQLNSYT
EEYYYTFDANVSGLKAVIDDLSSSPEIRRVFFSQSTKDLDIVLKTGGMILVNSAKGVLGKEKSRMVAQMV
TLVMQNAAQRRLPDKSPFFAFYEDEKNGYLMPGNDSNFLDESRKFHVPVMHAYQHDEQIRDSIGESGADA
IKMSYRNAFTFQQTSTKVVEFINLRSGGKHYALKETKRAANDDLLAGNQGNSSATSEEVVEEDNFTARDA
NNLEKFQVGGVIVSDDEVSNMIYLTTSPHFEMDISKDSFVSHTPFNRVYGLGEEEPEIAKSYKMWRAEVI
EYYAQKESESHLYESDFTDEEWQAIMDVKVPNVDSNVNDTVGKKDDSPSVKRTILVNDSITEHREGTSIR
EEVTEDIEQKEEVNNSEIPPVVEERQTVNSKNDIGELKDKEITQRVILAPSSTPETVDTQNIQAPNQEFE
LPQELSRVAREKATKTLKSNVGQMDIDEEEGF
MRKILKLFFNRYYTNGKRTIDILLYCWRKYIDWLYHISFGLFAFNIIMFIFRWRLPNWVFISLFIFLFVN
MALVLYIGVWHSNVTSRQIFVLFEKYDTLKRAERKKIIGKYAIRAALAAVFISSGLYVLTINNFILSLIN
RMYDVADNYLKYMPWSIPNGSQTGIVLSYHTLKPLIGADWFNSLLLLTPIGAIGLIFYNSYATGIAEKTY
EKLVGQWLGGRYFQDSVLSNIVHNQDEKGQANLVMGLNSKTGEQVILHANERTYHTIIFGLIGTGKSATI
LIPAMLQDMENMKYYLLSYRKYLMKVDEELEQEFFSTEFERKKKRRELLEQWYNNGYAAELTNGIYMTEP
SGSMYGTIVKYAHKMGFPDEMIWTLDPTNPGTGAINILDGDTTQVKGAVRDLFKRFSDPSGTGSSFFLNQ
EGQLTDNIITVIKEVALIPDAPINYMLKGKSPTLTEFSNMLRSSDWIEAYIAVFEQLLNRKKRLFEETLK
KHEEFLAQEKEKWLEESEYNREHEQLFDTILRPENVHEAINAFNDERNKLENLQSSYDYFINAHQLNSYT
EEYYYTFDANVSGLKAVIDDLSSSPEIRRVFFSQSTKDLDIVLKTGGMILVNSAKGVLGKEKSRMVAQMV
TLVMQNAAQRRLPDKSPFFAFYEDEKNGYLMPGNDSNFLDESRKFHVPVMHAYQHDEQIRDSIGESGADA
IKMSYRNAFTFQQTSTKVVEFINLRSGGKHYALKETKRAANDDLLAGNQGNSSATSEEVVEEDNFTARDA
NNLEKFQVGGVIVSDDEVSNMIYLTTSPHFEMDISKDSFVSHTPFNRVYGLGEEEPEIAKSYKMWRAEVI
EYYAQKESESHLYESDFTDEEWQAIMDVKVPNVDSNVNDTVGKKDDSPSVKRTILVNDSITEHREGTSIR
EEVTEDIEQKEEVNNSEIPPVVEERQTVNSKNDIGELKDKEITQRVILAPSSTPETVDTQNIQAPNQEFE
LPQELSRVAREKATKTLKSNVGQMDIDEEEGF
Protein domains
No domain identified.
Protein structure
No available structure.
Host bacterium
| ID | 15869 | GenBank | NZ_MN480762 |
| Plasmid name | pSsal-NU10 | Incompatibility group | - |
| Plasmid size | 190254 bp | Coordinate of oriT [Strand] | 166559..166613 [-] |
| Host baterium | Streptococcus salivarius strain NU10 |
Cargo genes
| Drug resistance gene | - |
| Virulence gene | - |
| Metal resistance gene | - |
| Degradation gene | - |
| Symbiosis gene | - |
| Anti-CRISPR | AcrIIA9 |