Detailed information of oriT
oriT
The information of the oriT region
oriTDB ID | 115335 |
Name | oriT_pEA04.5 |
Organism | Escherichia albertii strain EA04 |
Sequence Completeness | - |
NCBI accession of oriT (coordinates [strand]) | NZ_CP130161 (4858..4917 [-], 60 nt) |
oriT length | 60 nt |
IRs (inverted repeats) | _ |
Location of nic site | _ |
Conserved sequence flanking the nic site |
_ |
Note | Predicted by oriTfinder 2.0 |
oriT sequence
Download Length: 60 nt
>oriT_pEA04.5
GGGTGTCGGGGCGCAGCCCTGACCCAGTCACGTAGCGATAGCGGAGTGTATACTGGCTTA
GGGTGTCGGGGCGCAGCCCTGACCCAGTCACGTAGCGATAGCGGAGTGTATACTGGCTTA
Visualization of oriT structure
oriT secondary structure
Predicted by RNAfold.
Download structure fileHost bacterium
ID | 15769 | GenBank | NZ_CP130161 |
Plasmid name | pEA04.5 | Incompatibility group | ColRNAI |
Plasmid size | 5574 bp | Coordinate of oriT [Strand] | 4858..4917 [-] |
Host baterium | Escherichia albertii strain EA04 |
Cargo genes
Drug resistance gene | - |
Virulence gene | - |
Metal resistance gene | - |
Degradation gene | - |
Symbiosis gene | - |
Anti-CRISPR | - |