Detailed information of oriT

oriT

The information of the oriT region

• oriTDB ID: 115149
• Name: oriT_pISU2514
• Organism: Streptococcus suis strain ISU2514
• Sequence Completeness: -
• NCBI accession of oriT (coordinates [strand]): NZ_CP030021 (77..117 [+], 41 nt)
• oriT length: 41 nt
• IRs (inverted repeats): _
• Location of nic site: _
• Conserved sequence flanking the nic site: _
• Note: Predicted by oriTfinder 2.0

oriT sequence

• Length: 41 nt

>oriT_pISU2514
CACATTTATGAAGTAAAGTATAATGAATTATACTTTACATG

oriT secondary structure

Predicted by RNAfold.

Relaxase

mobV_DK875_RS11145_pISU2514

• ID: 9684
• GenBank: WP_226996454
• Name: mobV_DK875_RS11145_pISU2514
• UniProt ID: _
• Length: 496 a.a.
• Note: Predicted by oriTfinder 2.0

Relaxase protein sequence

• Length: 496 a.a.
• Molecular weight: 57722.23 Da
• Isoelectric Point: 5.7336

>WP_226996454.1 MobV family relaxase [Streptococcus suis]
MVARMQKMKAGNLGGAYKHNERVFETHSNKDIDPSRSHLNYELTGRDCSVSYEKQIKDYVNENKISNRAI
RKDAVLCDEWIITSDKSFFEKLSEEETREFFETAKNYFAENYGEDNIAYASVHLDESTPHMHMGVVPFQD
GKLSSKAMFDKEELKKIQEDLPKYMNDHGFELERGELNSEAKHKTVAEFKQEMAGKEIEKQLVLEYGAPE
YVNHQEELVTKEEYQEAYGVFQNELGAWLDKSDFSWRETTFQEKIDWVKNHQQEELQQLVSSRKPLEDEI
RTLNEVLKEKYEELDKIELRASESLSELSGVEGYINNLEKHSNALESKIGGLENEYLRLAKQNARLSDLK
IMSEKELAEIQPKKGMFGKEHVELTKEQFEKFKGLIYRSKNLVHEKELENDQLRRQMPLRSSKNGFEASL
QRAKDKTKGESIDRLKSEIRGLKNENSVLRQQNDKMLGKLIEFMPDKALKNFVSELKAIQPIVKIVKRVI
EKGLGL

Protein domains

Predicted by InterproScan.

• Plasmid recombination enzyme (Mob_Pre) (2-191)

Protein structure

No available structure.

Host bacterium

• ID: 15584
• GenBank: NZ_CP030021
• Plasmid name: pISU2514
• Incompatibility group: -
• Plasmid size: 5581 bp
• Coordinate of oriT [Strand]: 77..117 [+]
• Host baterium: Streptococcus suis strain ISU2514

Cargo genes

• Drug resistance gene: -
• Virulence gene: -
• Metal resistance gene: -
• Degradation gene: -
• Symbiosis gene: -
• Anti-CRISPR: -