Detailed information of oriT

oriT

The information of the oriT region

• oriTDB ID: 115148
• Name: oriT_pISU2614
• Organism: Streptococcus suis strain ISU2614
• Sequence Completeness: -
• NCBI accession of oriT (coordinates [strand]): NZ_CP031378 (2046..2086 [+], 41 nt)
• oriT length: 41 nt
• IRs (inverted repeats): _
• Location of nic site: _
• Conserved sequence flanking the nic site: _
• Note: Predicted by oriTfinder 2.0

oriT sequence

• Length: 41 nt

>oriT_pISU2614
CACATTTACGAAGTAAAGTATAATACGTTATACTTTACATG

oriT secondary structure

Predicted by RNAfold.

Relaxase

mobV_DK237_RS10895_pISU2614

• ID: 9683
• GenBank: WP_010891399
• Name: mobV_DK237_RS10895_pISU2614
• UniProt ID: Q9S5D7
• Length: 499 a.a.
• Note: Predicted by oriTfinder 2.0

Relaxase protein sequence

• Length: 499 a.a.
• Molecular weight: 58394.88 Da
• Isoelectric Point: 5.7393

>WP_010891399.1 MobV family relaxase [Streptococcus suis]
MSYMVARMQKMKAGNLGGAYKHNERVFETHSNKDIDPSRSHLNYELTDRDRSVSYERQIKDYVNENKISN
RAIRKDAVLCDEWIITSDKSFFEKLSEEETREFFETAKNYFAENYGEDNIAYASVHLDESTPHMHMGVVP
FQDGKLSSKAMFDKEELKKIQEDLPKYMNEHGFELERGELNSEAKHKTVAEFKQEMAGKEIEKQLVLEYG
APEYVNHQEEFVTKEEYQEAYEVFQNELGAWLDKSDFSWRETTFQEKIDWVKNHQQEELQQLVSSRKPLE
DEIRTLNEVLKEKYEELDKIELRASESLSELSGVEGYINNLEKHSSALESKIGGLENEYLRLAKQNARLS
DLKIMSEKELAEIQPKKGMFGKEHVELTKEQFEKFKGLIYRSKNLVHEKELENDQLRRQMPLRSSKNGFE
ASLQRAKDKTKGESIDRLKSEIRGLKNENSVLRQQNDKMLGKLREFMPDKALNNFISELKSIKPIVKIVK
RVIEKGLGL

Protein domains

Predicted by InterproScan.

• Plasmid recombination enzyme (Mob_Pre) (1-194)

Protein structure

• AlphaFold DB: Q9S5D7

Host bacterium

• ID: 15583
• GenBank: NZ_CP031378
• Plasmid name: pISU2614
• Incompatibility group: -
• Plasmid size: 4984 bp
• Coordinate of oriT [Strand]: 2046..2086 [+]
• Host baterium: Streptococcus suis strain ISU2614

Cargo genes

• Drug resistance gene: -
• Virulence gene: -
• Metal resistance gene: -
• Degradation gene: -
• Symbiosis gene: -
• Anti-CRISPR: -