Detailed information of oriT

oriT

The information of the oriT region

• oriTDB ID: 114379
• Name: oriT_pA7BH1
• Organism: Pseudomonas sp. strain ANT_H7B
• Sequence Completeness: -
• NCBI accession of oriT (coordinates [strand]): NZ_MK376341 (1715..1744 [-], 30 nt)
• oriT length: 30 nt
• IRs (inverted repeats): 2..7, 11..16 (GCAAAC..GTTTGC)
• Location of nic site: _
• Conserved sequence flanking the nic site: _
• Note: Predicted by oriTfinder 2.0

oriT sequence

• Length: 30 nt

>oriT_pA7BH1
CGCAAACGAAGTTTGCATAAGTGCGCCCTT

oriT secondary structure

Predicted by RNAfold.

Relaxase

MobA_MobL_HXI58_RS00015_pA7BH1

• ID: 9220
• GenBank: WP_176704736
• Name: MobA_MobL_HXI58_RS00015_pA7BH1
• UniProt ID: _
• Length: 595 a.a.
• Note: Predicted by oriTfinder 2.0

Relaxase protein sequence

• Length: 595 a.a.
• Molecular weight: 65243.04 Da
• Isoelectric Point: 6.0492

>WP_176704736.1 MobA/MobL family protein [Pseudomonas sp.]
MSIYSASLKTISRSVGSSATAAAAYRLGEVIEDERTGECHDYTRRGGVEGTFAFAPAGTAPLPAAKLWNA
AEAAEGRKNSTVARELLIALPHDLDPDQRESLTRAIAAQVADRYGVAGSVGIHAPDAEGDQRNYHAHILF
TTRSVDQDGKLGAKTRVLDDKKSGPAETIWIRKMVEQETNAALEAAGVESRVDCRSLKDQRAAALEMGNL
ELAQELDRAPQTHEGPKVTDIRREAAREGREVLGALDRAAANDAQHFDIDADRAELAEVVSMIEHIEKRT
AERETAHVEAIHENGLRDRLKVALTDFDSVRSERIDLAIKLDAGKPRFVLDALDLKKEMVRANREAEAWR
KAHPIAAKLADSTGIKPETDRKAERASEAYMKSPELKEARAWTAENKIDKARYVELTETFESSKVEIRAL
KKELSALNSADPETLQAIKTEVAQAVESARPEIADFVDNHRTQIEAAAEIGAGLDAWISTDIITTGNPAI
DDLSRKAAQFRSRMLREETARAEKNEHLMASAVRKAQASFKVAFDSAFRSAAREAEPKVDHAAEARKRAL
EAAAAAFRVPQQAAAKSSYVPTWKRGHDTDLKYEP

Protein domains

Predicted by InterproScan.

• MobA/MobL family (MobA_MobL) (18-231)

Protein structure

No available structure.

Host bacterium

• ID: 14814
• GenBank: NZ_MK376341
• Plasmid name: pA7BH1
• Incompatibility group: -
• Plasmid size: 10451 bp
• Coordinate of oriT [Strand]: 1715..1744 [-]
• Host baterium: Pseudomonas sp. strain ANT_H7B

Cargo genes

• Drug resistance gene: -
• Virulence gene: -
• Metal resistance gene: -
• Degradation gene: -
• Symbiosis gene: -
• Anti-CRISPR: -