Detailed information of oriT
oriT
The information of the oriT region
| oriTDB ID | 113558 |
| Name | oriT_FDAARGOS_715|unnamed5  |
| Organism | Shigella sonnei strain FDAARGOS_715 |
| Sequence Completeness | - |
| NCBI accession of oriT (coordinates [strand]) | NZ_CP046290 (1734..1808 [+], 75 nt) |
| oriT length | 75 nt |
| IRs (inverted repeats) | _ |
| Location of nic site | _ |
| Conserved sequence flanking the nic site |
_ |
| Note | Predicted by oriTfinder 2.0 |
oriT sequence
Download Length: 75 nt
>oriT_FDAARGOS_715|unnamed5
GTCGGGGCGAAGCCCTGACCAGGGTAATTGTAATAGCGTGCATGTATGCGCGGTATAACAATTACACATCCTGTC
GTCGGGGCGAAGCCCTGACCAGGGTAATTGTAATAGCGTGCATGTATGCGCGGTATAACAATTACACATCCTGTC
Visualization of oriT structure
oriT secondary structure
Predicted by RNAfold.
Download structure file
Host bacterium
| ID | 13993 | GenBank | NZ_CP046290 |
| Plasmid name | FDAARGOS_715|unnamed5 | Incompatibility group | Col440I |
| Plasmid size | 2557 bp | Coordinate of oriT [Strand] | 1734..1808 [+] |
| Host baterium | Shigella sonnei strain FDAARGOS_715 |
Cargo genes
| Drug resistance gene | - |
| Virulence gene | - |
| Metal resistance gene | - |
| Degradation gene | - |
| Symbiosis gene | - |
| Anti-CRISPR | - |