Detailed information of oriT
oriT
The information of the oriT region
| oriTDB ID | 113116 |
| Name | oriT_KS-P079|pla3  |
| Organism | Escherichia sp. KS167_9B strain KS-P079 |
| Sequence Completeness | - |
| NCBI accession of oriT (coordinates [strand]) | NZ_AP025757 (6840..6899 [-], 60 nt) |
| oriT length | 60 nt |
| IRs (inverted repeats) | _ |
| Location of nic site | _ |
| Conserved sequence flanking the nic site |
_ |
| Note | Predicted by oriTfinder 2.0 |
oriT sequence
Download Length: 60 nt
>oriT_KS-P079|pla3
GGGTGTCGGGGCGCAGCCATGACCCAGTCACGTAGCGATAGCGGAGTGTATACTGGCTTA
GGGTGTCGGGGCGCAGCCATGACCCAGTCACGTAGCGATAGCGGAGTGTATACTGGCTTA
Visualization of oriT structure
oriT secondary structure
Predicted by RNAfold.
Download structure file
Host bacterium
| ID | 13551 | GenBank | NZ_AP025757 |
| Plasmid name | KS-P079|pla3 | Incompatibility group | ColRNAI |
| Plasmid size | 6965 bp | Coordinate of oriT [Strand] | 6840..6899 [-] |
| Host baterium | Escherichia sp. KS167_9B strain KS-P079 |
Cargo genes
| Drug resistance gene | - |
| Virulence gene | - |
| Metal resistance gene | - |
| Degradation gene | - |
| Symbiosis gene | - |
| Anti-CRISPR | - |