Detailed information of oriT

oriT

The information of the oriT region

• oriTDB ID: 111796
• Name: oriT_p14154D
• Organism: Salmonella sp. SJTUF14154
• Sequence Completeness: -
• NCBI accession of oriT (coordinates [strand]): NZ_CP064670 (3531..3590 [-], 60 nt)
• oriT length: 60 nt
• IRs (inverted repeats): _
• Location of nic site: _
• Conserved sequence flanking the nic site: _
• Note: Predicted by oriTfinder 2.0

oriT sequence

• Length: 60 nt

>oriT_p14154D
GGGTTTCGGGGCGCAGCCCTGAACCAGTCACGTAGCGCTAGCGGAGTGTATACTGGCTTA

oriT secondary structure

Predicted by RNAfold.

Host bacterium

• ID: 12231
• GenBank: NZ_CP064670
• Plasmid name: p14154D
• Incompatibility group: ColRNAI
• Plasmid size: 4018 bp
• Coordinate of oriT [Strand]: 3531..3590 [-]
• Host baterium: Salmonella sp. SJTUF14154

Cargo genes

• Drug resistance gene: -
• Virulence gene: -
• Metal resistance gene: -
• Degradation gene: -
• Symbiosis gene: -
• Anti-CRISPR: -