Detailed information of oriT

oriT

The information of the oriT region

• oriTDB ID: 109636
• Name: oriT1_94|unnamed3
• Organism: Yersinia pestis strain 94
• Sequence Completeness: -
• NCBI accession of oriT (coordinates [strand]): NZ_CP084342 ( 3366..3425 [-], 60 nt)
• oriT length: 60 nt
• IRs (inverted repeats): _
• Location of nic site: _
• Conserved sequence flanking the nic site: _
• Note: Predicted by oriTfinder 2.0

oriT sequence

• Length: 60 nt

>oriT1_94|unnamed3
GGGTGTCGGGGCGCAGCCATGACCCAGTCACGTAGCGATAGCGGAGTGTATACTGGCTTA

oriT secondary structure

Predicted by RNAfold.

Host bacterium

• ID: 10071
• GenBank: NZ_CP084342
• Plasmid name: 94|unnamed3
• Incompatibility group: ColRNAI
• Plasmid size: 18011 bp
• Coordinate of oriT [Strand]: 12975..13034 [-]; 3366..3425 [-]
• Host baterium: Yersinia pestis strain 94

Cargo genes

• Drug resistance gene: -
• Virulence gene: -
• Metal resistance gene: -
• Degradation gene: -
• Symbiosis gene: -
• Anti-CRISPR: -