Detailed information of oriT
oriT
The information of the oriT region
| oriTDB ID | 108962 |
| Name | oriT_pB-4548_2  |
| Organism | Salmonella enterica subsp. enterica serovar Gallinarum strain SCPM-O-B-4548 |
| Sequence Completeness | - |
| NCBI accession of oriT (coordinates [strand]) | NZ_CP088144 (351..410 [-], 60 nt) |
| oriT length | 60 nt |
| IRs (inverted repeats) | _ |
| Location of nic site | _ |
| Conserved sequence flanking the nic site |
_ |
| Note | Predicted by oriTfinder 2.0 |
oriT sequence
Download Length: 60 nt
>oriT_pB-4548_2
GGGTGTCGGGGCGCAGCCCTGACCCAGTCACGTAGCGATAGCGGAGTGTATACTGGCTTA
GGGTGTCGGGGCGCAGCCCTGACCCAGTCACGTAGCGATAGCGGAGTGTATACTGGCTTA
Visualization of oriT structure
oriT secondary structure
Predicted by RNAfold.
Download structure file
Host bacterium
| ID | 9397 | GenBank | NZ_CP088144 |
| Plasmid name | pB-4548_2 | Incompatibility group | ColRNAI |
| Plasmid size | 4634 bp | Coordinate of oriT [Strand] | 351..410 [-] |
| Host baterium | Salmonella enterica subsp. enterica serovar Gallinarum strain SCPM-O-B-4548 |
Cargo genes
| Drug resistance gene | - |
| Virulence gene | - |
| Metal resistance gene | - |
| Degradation gene | - |
| Symbiosis gene | - |
| Anti-CRISPR | - |