Detailed information of oriT
oriT
The information of the oriT region
| oriTDB ID | 108568 |
| Name | oriT_CHAL3|unnamed  |
| Organism | Staphylococcus aureus strain CHAL3 |
| Sequence Completeness | - |
| NCBI accession of oriT (coordinates [strand]) | NZ_CP125900 (15531..15721 [+], 191 nt) |
| oriT length | 191 nt |
| IRs (inverted repeats) | 135..140, 144..149 (TCTGGC..GCCAGA) 4..11, 23..30 (CTTTTTTA..TAAAAAAG) 16..21, 24..29 (TTTTTT..AAAAAA) |
| Location of nic site | _ |
| Conserved sequence flanking the nic site |
_ |
| Note | Predicted by oriTfinder 2.0 |
oriT sequence
Download Length: 191 nt
>oriT_CHAL3|unnamed
TGTCTTTTTTATTGATTTTTTGTAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAGTGTGACACTACAGCTTTTTATGATATCACTTTAAAATTACTTAAAACCCTTGGAATGATCTGGCTTTGCCAGACCTATTATTTTTGAATGATAGCAAATTCTCCTTATGCTCTTA
TGTCTTTTTTATTGATTTTTTGTAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAGTGTGACACTACAGCTTTTTATGATATCACTTTAAAATTACTTAAAACCCTTGGAATGATCTGGCTTTGCCAGACCTATTATTTTTGAATGATAGCAAATTCTCCTTATGCTCTTA
Visualization of oriT structure
oriT secondary structure
Predicted by RNAfold.
Download structure file
Host bacterium
| ID | 9003 | GenBank | NZ_CP125900 |
| Plasmid name | CHAL3|unnamed | Incompatibility group | - |
| Plasmid size | 31359 bp | Coordinate of oriT [Strand] | 15531..15721 [+] |
| Host baterium | Staphylococcus aureus strain CHAL3 |
Cargo genes
| Drug resistance gene | blaZ |
| Virulence gene | - |
| Metal resistance gene | - |
| Degradation gene | - |
| Symbiosis gene | - |
| Anti-CRISPR | AcrIIA21 |