Detailed information of oriT

oriT

The information of the oriT region

• oriTDB ID: 108512
• Name: oriT_p732-c
• Organism: Enterococcus faecalis strain 732
• Sequence Completeness: -
• NCBI accession of oriT (coordinates [strand]): NZ_CP091234 (3546..3595 [-], 50 nt)
• oriT length: 50 nt
• IRs (inverted repeats): _
• Location of nic site: 34..35
• Conserved sequence flanking the nic site: GCTTGCAAAA
• Note: Predicted by oriTfinder 2.0

oriT sequence

• Length: 50 nt

>oriT_p732-c
AATATCGCAACATGGTACCATGTTGCTCCGCTTGCAAAAAGAAAGCCTAC

oriT secondary structure

Predicted by RNAfold.

Relaxase

mobV_LQ055_RS14845_p732-c

• ID: 5689
• GenBank: WP_048967851
• Name: mobV_LQ055_RS14845_p732-c
• UniProt ID: _
• Length: 559 a.a.
• Note: Predicted by oriTfinder 2.0

Relaxase protein sequence

• Length: 559 a.a.
• Molecular weight: 65161.57 Da
• Isoelectric Point: 7.6288

>WP_048967851.1 MobV family relaxase [Enterococcus faecalis]
MSKIVARMEKMKDGNLSGIQRHNQRETNNHSNPDIDIEKSHLNYDLVNPGSINYREKIKQIIESQRISKR
AVRKDAVLVNEWIITSDTAFFQENTDTQAFFTDVVAYFSDRCGRQNVAYATVHLDETTPHMHLGIVPMYE
GRLSSKQVFSRQNLLEIQEELPTYLQERGYAIERGLRGSPQKHLSVKEYKDVQKELQVSKQELANQEQIL
AEKERELHSYEQAIFRIDRLLEEKNEEVKVKVQVMNQLETKRNEIINSLQTTVLPDLANIKEKKFSFNGL
KYVLSASDLSAIKSITKDFETLRTQNKHLKIENNTLAQKNKELTQVNHEQELQITDLAYELTLKKEQLTA
FEEKQLNYDQSEQIKQELDRTTQTVSVLETENKRLKDKITDLTYDFSELNEKYQEIKLKFDGLTTYLHER
LGQAKETILFTIQQGVKYLQNAPKLKKSLERYSKDRTYLIDEKGTLFLPPDTGSKGVTMSLNPHFYPLKA
PFYNRETGCYEFVGEYMANGRSRTNTLQLSEEQVLENKAFTFEQSTDRKVWQESKNHSKGLSKNRGLSR

Protein domains

Predicted by InterproScan.

• Plasmid recombination enzyme (Mob_Pre) (2-191)

Protein structure

No available structure.

Host bacterium

• ID: 8947
• GenBank: NZ_CP091234
• Plasmid name: p732-c
• Incompatibility group: -
• Plasmid size: 4825 bp
• Coordinate of oriT [Strand]: 3546..3595 [-]
• Host baterium: Enterococcus faecalis strain 732

Cargo genes

• Drug resistance gene: -
• Virulence gene: -
• Metal resistance gene: -
• Degradation gene: -
• Symbiosis gene: -
• Anti-CRISPR: -