Detailed information of oriT

oriT


The information of the oriT region


oriTDB ID   107997
Name   oriT_KF140|unnamed3 in_silico
Organism   Lactococcus lactis strain KF140
Sequence Completeness      -
NCBI accession of oriT (coordinates [strand])   NZ_CP070385 (1936..2072 [-], 137 nt)
oriT length   137 nt
IRs (inverted repeats)     _
Location of nic site      104..105
Conserved sequence flanking the
  nic site  
 
 GCTTGCAGTA
Note   Predicted by oriTfinder 2.0

  oriT sequence  


Download         Length: 137 nt

>oriT_KF140|unnamed3
CGACACAATCCAAAGGGGATAAAAGGGGAAAGTGAAACTTCCTCCTTTTCAAGCAACATTGTAATACAAGAACGAAGTGATTTGTATTACAATGTGATAGCTTGCAGTATTTATGGTTTTATATGGTCTATTTTGTT

Visualization of oriT structure

  oriT secondary structure

Predicted by RNAfold.

Download structure file


Host bacterium


ID   8432 GenBank   NZ_CP070385
Plasmid name   KF140|unnamed3 Incompatibility group   -
Plasmid size   6833 bp Coordinate of oriT [Strand]   1936..2072 [-]
Host baterium   Lactococcus lactis strain KF140

Cargo genes


Drug resistance gene   -
Virulence gene   -
Metal resistance gene   -
Degradation gene   -
Symbiosis gene   -
Anti-CRISPR   -