Detailed information of oriT

oriT


The information of the oriT region


oriTDB ID   107890
Name   oriT_pJBIWA005_6 in_silico
Organism   Enterobacter sp. JBIWA005
Sequence Completeness      -
NCBI accession of oriT (coordinates [strand])   NZ_CP074165 (4182..4239 [-], 58 nt)
oriT length   58 nt
IRs (inverted repeats)      29..36, 39..46  (CACAGCGT..ACGCTGTG)
Location of nic site      _
Conserved sequence flanking the
  nic site  
 
 _
Note   Predicted by oriTfinder 2.0

  oriT sequence  


Download         Length: 58 nt

>oriT_pJBIWA005_6
GGGTTTCGGGGCGCAGCCCTGAACCAGTCACAGCGTTTACGCTGTGTATACTGGCTTA

Visualization of oriT structure

  oriT secondary structure

Predicted by RNAfold.

Download structure file


Host bacterium


ID   8325 GenBank   NZ_CP074165
Plasmid name   pJBIWA005_6 Incompatibility group   ColRNAI
Plasmid size   6141 bp Coordinate of oriT [Strand]   4182..4239 [-]
Host baterium   Enterobacter sp. JBIWA005

Cargo genes


Drug resistance gene   -
Virulence gene   -
Metal resistance gene   -
Degradation gene   -
Symbiosis gene   -
Anti-CRISPR   -