Detailed information of oriT

oriT

The information of the oriT region


oriTDB ID   107830
Name   oriT_FAM24671|unnamed1 in_silico
Organism   Morganella morganii strain FAM24671
Sequence Completeness      -
NCBI accession of oriT (coordinates [strand])   NZ_CP066139 (9372..9416 [+], 45 nt)
oriT length   45 nt
IRs (inverted repeats)      7..13, 25..31  (CGTTTCT..AGAAACG)
Location of nic site      _
Conserved sequence flanking the
  nic site    		  _
Note   Predicted by oriTfinder 2.0

  oriT sequence  


Download         Length: 45 nt

>oriT_FAM24671|unnamed1
GCGCACCGTTTCTGAATATAGTGAAGAAACGTCTAAGTGCGCCCT

Visualization of oriT structure

  oriT secondary structure

Predicted by RNAfold.

Download structure file


Relaxase

ID   5255 GenBank   WP_218430339
Name   mobA_JC830_RS20530_FAM24671|unnamed1 insolico UniProt ID   _
Length   369 a.a. PDB ID   
Note   Predicted by oriTfinder 2.0

  Relaxase protein sequence


Download         Length: 369 a.a.        Molecular weight: 42850.46 Da        Isoelectric Point: 6.4019

>WP_218430339.1 mobilization protein MobA [Morganella morganii]
MASYHLSVKTGGKGNASPHADYISREGKYAREKDSDLEHKESGNMPAWAAHKPSEFWKAADTFERANGCT
YREIEIALPRELKPEQRLELVRDFVRQEIGDRHAYQFAIHNPKAAIAGGEQPHAHIMFSERMNDGIERDP
QQYFKRANNKEPERGGAKKVRFGETPTERKEHLVAQRERWADLQNTYLERHQHTDRVDSRSLKAQGIERE
PERHLGAGQVQRFDTEQLQSILARREAERQAQQSRDERDCVIDVTTSLREAIHERDDASVKPAQQPEPEV
AAGITFDFEKEPDKLNALVSDAMKDVQEEIDLQSLVNDAMAEFQGIHQEMERQRERERLAEKQRQQEKER
QRLAEQIRQKPDKGWSFSR

  Protein domains


Predicted by InterproScan.

MobA/MobL family (MobA_MobL)

(42-218)


  Protein structure



No available structure.




Host bacterium

ID   8265 GenBank   NZ_CP066139
Plasmid name   FAM24671|unnamed1 Incompatibility group   ColE10
Plasmid size   10567 bp Coordinate of oriT [Strand]   9372..9416 [+]
Host baterium   Morganella morganii strain FAM24671

Cargo genes

Drug resistance gene   -
Virulence gene   -
Metal resistance gene   -
Degradation gene   -
Symbiosis gene   -
Anti-CRISPR   -