Detailed information of oriT

oriT

The information of the oriT region


oriTDB ID   107829
Name   oriT_FAM24675|unnamed3 in_silico
Organism   Morganella morganii strain FAM24675
Sequence Completeness      -
NCBI accession of oriT (coordinates [strand])   NZ_CP066136 (3165..3209 [-], 45 nt)
oriT length   45 nt
IRs (inverted repeats)      7..13, 25..31  (CGTTTCT..AGAAACG)
Location of nic site      _
Conserved sequence flanking the
  nic site    		  _
Note   Predicted by oriTfinder 2.0

  oriT sequence  


Download         Length: 45 nt

>oriT_FAM24675|unnamed3
GCGCACCGTTTCTGAACGAAGTGAAGAAACGTCTAAGTGCGCCCT

Visualization of oriT structure

  oriT secondary structure

Predicted by RNAfold.

Download structure file


Relaxase

ID   5254 GenBank   WP_218455738
Name   MobA_MobL_JC826_RS20435_FAM24675|unnamed3 insolico UniProt ID   _
Length   369 a.a. PDB ID   
Note   Predicted by oriTfinder 2.0

  Relaxase protein sequence


Download         Length: 369 a.a.        Molecular weight: 43025.61 Da        Isoelectric Point: 6.1350

>WP_218455738.1 MobA/MobL family protein [Morganella morganii]
MASYHLSVKTGGKGKAASHADYIAREGKYAREKDNDLEHKESGNMPLWAAHKPSEFWKAADTFERANGCT
YREIEIALPRELKPEQRLELVRDFVHQEIGDHHAYQFAIHNPKAAIEGGEQPHAHIMFSERLNDGIERDP
QPYFKRANTKNPERGGAKKVRFGESPTERKAFLVAQRERWATLQNDHLERYQHPERVDARSLKAQGIERE
PERHFGAGQVRQFEPEQLHAVIERREAEQQAQQSRDERDSVIDVTTSLREALAERDDVTETPKRDVMQNE
AQGRTFDFEKEPEKLTPLVSDALSEIQDEIDLQSLINESMAEFQGIHQDMVKQQEREYWAEQQRQQEKER
QRLAEQKRQKPDKGWSFSR

  Protein domains


Predicted by InterproScan.

MobA/MobL family (MobA_MobL)

(42-218)


  Protein structure



No available structure.




Host bacterium

ID   8264 GenBank   NZ_CP066136
Plasmid name   FAM24675|unnamed3 Incompatibility group   ColE10
Plasmid size   9938 bp Coordinate of oriT [Strand]   3165..3209 [-]
Host baterium   Morganella morganii strain FAM24675

Cargo genes

Drug resistance gene   -
Virulence gene   -
Metal resistance gene   -
Degradation gene   -
Symbiosis gene   -
Anti-CRISPR   -