Detailed information of oriT
oriT
The information of the oriT region
| oriTDB ID | 107818 |
| Name | oriT_Effluent_2|unnamed5  |
| Organism | Enterobacter cloacae strain Effluent_2 |
| Sequence Completeness | - |
| NCBI accession of oriT (coordinates [strand]) | NZ_CP039324 (386..443 [+], 58 nt) |
| oriT length | 58 nt |
| IRs (inverted repeats) | _ |
| Location of nic site | _ |
| Conserved sequence flanking the nic site |
_ |
| Note | Predicted by oriTfinder 2.0 |
oriT sequence
Download Length: 58 nt
>oriT_Effluent_2|unnamed5
GGGTTTCGGGGCGCAGCCCTGAACCAGTCACGTAGCGCTAGCGGAGTGTATAATGGCT
GGGTTTCGGGGCGCAGCCCTGAACCAGTCACGTAGCGCTAGCGGAGTGTATAATGGCT
Visualization of oriT structure
oriT secondary structure
Predicted by RNAfold.
Download structure file
Host bacterium
| ID | 8253 | GenBank | NZ_CP039324 |
| Plasmid name | Effluent_2|unnamed5 | Incompatibility group | Col440II |
| Plasmid size | 5134 bp | Coordinate of oriT [Strand] | 386..443 [+] |
| Host baterium | Enterobacter cloacae strain Effluent_2 |
Cargo genes
| Drug resistance gene | - |
| Virulence gene | - |
| Metal resistance gene | - |
| Degradation gene | - |
| Symbiosis gene | - |
| Anti-CRISPR | - |