Detailed information of oriT

oriT

The information of the oriT region

• oriTDB ID: 106439
• Name: oriT_p15092
• Organism: Bacillus thuringiensis Bt18247
• Sequence Completeness: -
• NCBI accession of oriT (coordinates [strand]): NZ_CP015255 (1208..1246 [-], 39 nt)
• oriT length: 39 nt
• IRs (inverted repeats): 1..6, 11..16 (CTTTAC..GTAAAG)
• Location of nic site: _
• Conserved sequence flanking the nic site: _
• Note: Predicted by oriTfinder 2.0

oriT sequence

• Length: 39 nt

>oriT_p15092
CTTTACGATAGTAAAGTATAGTATGCTATACTTTACATG

oriT secondary structure

Predicted by RNAfold.

Relaxase

mobV_BTI247_RS31160_p15092

• ID: 4295
• GenBank: WP_069356937
• Name: mobV_BTI247_RS31160_p15092
• UniProt ID: _
• Length: 408 a.a.
• Note: Predicted by oriTfinder 2.0

Relaxase protein sequence

• Length: 408 a.a.
• Molecular weight: 48217.02 Da
• Isoelectric Point: 9.3993

>WP_069356937.1 MobV family relaxase [Bacillus thuringiensis]
MSYAICRMQKFKMRDVKGIQIHNQREKESHTNHDIKSERTYLNYDLHNDSHIDYLKTVKDKIEQNVETNR
VIRKDAVVMCEFVVTSDREFFDVLDMVDPAQQKVFFKEAYNFLKDRYGEENIVHAVVHLDEKTPHMHVGM
VPVTEENTLSAKQIFNRKELVSLQDDFHAHMVEKGFYLERGVSSDKKHVKMRKLKAMTAKEEIKVLETEL
GQYLQKKEVVNKQMEQLESRLNQLQNAVKSTNKVDKIEVKHKGGLLRSKTVEMSVEDFEELKTKAKASEA
FKRENMTLHRKNEALQASNTDLHTTVKRLEKENEELKPYKGKYEHLAKLFDEMNKFYEQFIPKEVSTFHE
IIGFCKRKVNASINRFSSFRYSEKALNENEKKGYETASKFLATQQKQQRKERGYEREL

Protein domains

Predicted by InterproScan.

• Plasmid recombination enzyme (Mob_Pre) (1-195)

Protein structure

No available structure.

Host bacterium

• ID: 6876
• GenBank: NZ_CP015255
• Plasmid name: p15092
• Incompatibility group: -
• Plasmid size: 15092 bp
• Coordinate of oriT [Strand]: 1208..1246 [-]
• Host baterium: Bacillus thuringiensis Bt18247

Cargo genes

• Drug resistance gene: -
• Virulence gene: -
• Metal resistance gene: -
• Degradation gene: -
• Symbiosis gene: -
• Anti-CRISPR: -