Detailed information of oriT

oriT

The information of the oriT region

• oriTDB ID: 106305
• Name: oriT_ATCC 4200|unnamed
• Organism: Enterococcus faecalis ATCC 4200
• Sequence Completeness: -
• NCBI accession of oriT (coordinates [strand]): NZ_GG670384 (3067..3116 [+], 50 nt)
• oriT length: 50 nt
• IRs (inverted repeats): _
• Location of nic site: _
• Conserved sequence flanking the nic site: _
• Note: Predicted by oriTfinder 2.0

oriT sequence

• Length: 50 nt

>oriT_ATCC 4200|unnamed
AATATCGCAACATGCTAGCATATTGCTCTGCTCGCAAAAAGAAAGCCTAC

oriT secondary structure

Predicted by RNAfold.

Relaxase

mobV_EFDG_RS20365_ATCC 4200|unnamed

• ID: 4216
• GenBank: WP_002364282
• Name: mobV_EFDG_RS20365_ATCC 4200|unnamed
• UniProt ID: _
• Length: 559 a.a.
• Note: Predicted by oriTfinder 2.0

Relaxase protein sequence

• Length: 559 a.a.
• Molecular weight: 65001.58 Da
• Isoelectric Point: 8.8302

>WP_002364282.1 MobV family relaxase [Enterococcus faecalis]
MSKIVARMEKMKVGNLSGIQRHNQRETDNHSNPDIDIEKSHLNYDLVNPGSINYREKIKQIIESQRISKR
AVRKDAVLVNEWIITSDTAFFQENTDTQAFFTDVVAYFSDRCGRQNVAYATVHLDETTPHMHLGIVPMYE
GRLSSKQVFSRQSLLEIQEELPNYLKERGYAIERGLRGSPQKHLSVKEYKDVQKELQVSKQELANQEQIL
AEKERELHSYEQAIFRIDRLLEEKNEEVKGKVQAMNQLEAKRNEIINSLQTTVLPDLANVKEKKFSLNGL
KYVLSASDLSAIKSITKDFETLRTQNKHLKIDNNTLAQENKELKQVNHVQELQITDLTHELTLKKEQLTA
FEEKQLNYDQSEQIKQELDKTTQKVSVLETDNKRLKDKITDLTYDFSELNEKYQEIKLKFDGLTTYLHER
LGQAKETILFTIQQGVKYLQNAPKLKKSLERYSKDRTYLIDEKGTLFLPPDTGSKGVTMSLNPHFYPLKA
PFYNRETGCYEFVGEYMANGRSRTNTLQLSEEQVLEKKAFTFEQSTDKKAWQQSKKYSRDMSKGRGLSR

Protein domains

Predicted by InterproScan.

• Plasmid recombination enzyme (Mob_Pre) (2-191)

Protein structure

No available structure.

Host bacterium

• ID: 6742
• GenBank: NZ_GG670384
• Plasmid name: ATCC 4200|unnamed
• Incompatibility group: -
• Plasmid size: 5127 bp
• Coordinate of oriT [Strand]: 3067..3116 [+]
• Host baterium: Enterococcus faecalis ATCC 4200

Cargo genes

• Drug resistance gene: -
• Virulence gene: -
• Metal resistance gene: -
• Degradation gene: -
• Symbiosis gene: -
• Anti-CRISPR: -