Detailed information of oriT

oriT

The information of the oriT region

• oriTDB ID: 106204
• Name: oriT_pW18-2-c
• Organism: Moellerella wisconsensis strain W18-2
• Sequence Completeness: -
• NCBI accession of oriT (coordinates [strand]): NZ_CP093252 (8546..8590 [-], 45 nt)
• oriT length: 45 nt
• IRs (inverted repeats): 7..13, 25..31 (CGTTTCT..AGAAACG)
• Location of nic site: _
• Conserved sequence flanking the nic site: _
• Note: Predicted by oriTfinder 2.0

oriT sequence

• Length: 45 nt

>oriT_pW18-2-c
GCGCACCGTTTCTGAATGAAGTGAAGAAACGTCTAAGTGCGCCCT

oriT secondary structure

Predicted by RNAfold.

Relaxase

MobA_MobL_MNY64_RS18235_pW18-2-c

• ID: 4155
• GenBank: WP_241543995
• Name: MobA_MobL_MNY64_RS18235_pW18-2-c
• UniProt ID: _
• Length: 369 a.a.
• Note: Predicted by oriTfinder 2.0

Relaxase protein sequence

• Length: 369 a.a.
• Molecular weight: 43074.63 Da
• Isoelectric Point: 6.2870

>WP_241543995.1 MobA/MobL family protein [Moellerella wisconsensis]
MASYHLSVKTGGKGKATSHADYIAREGKYAREKDNDLEHQESGNMTAWAAHKPSEFWKAADTFERANGCT
YREIEIALPRELTPTQRLELVRDFVQQEIGDRHAYQFAIHNPRAAIEGGEQPHAHIMFSERLNDGIERDP
QPYFKRANTKNPERGGAKKVRFGETPTERKEYLIAQRERWATLQNDTLKRYQHPDRVDARTLKAQGLERE
PERHFGAGQVRQFEPEQLHAVMERREAERQAQHCRDERDSVIDVTTSLREALAERDSGTETPKRDVMQNE
AQGRTFDFEKDPEKLTPLVNDALSEIQEEIDLQSLINDSMAEFQGIHQEMVKQQEREYWAEQQRQQEKEQ
QRLAEHKRQKPDKGWSFSR

Protein domains

Predicted by InterproScan.

• MobA/MobL family (MobA_MobL) (24-218)

Protein structure

No available structure.

Host bacterium

• ID: 6641
• GenBank: NZ_CP093252
• Plasmid name: pW18-2-c
• Incompatibility group: ColE10
• Plasmid size: 10213 bp
• Coordinate of oriT [Strand]: 8546..8590 [-]
• Host baterium: Moellerella wisconsensis strain W18-2

Cargo genes

• Drug resistance gene: -
• Virulence gene: -
• Metal resistance gene: -
• Degradation gene: -
• Symbiosis gene: -
• Anti-CRISPR: -