Detailed information of oriT

oriT


The information of the oriT region


oriTDB ID   105803
Name   oriT_pMHMC-006 in_silico
Organism   Shigella sonnei strain 506
Sequence Completeness      -
NCBI accession of oriT (coordinates [strand])   NZ_CP053757 (4501..4560 [-], 60 nt)
oriT length   60 nt
IRs (inverted repeats)     _
Location of nic site      _
Conserved sequence flanking the
  nic site  
 
 _
Note   Predicted by oriTfinder 2.0

  oriT sequence  


Download         Length: 60 nt

>oriT_pMHMC-006
GGGTGTCGGGGCGCAGCCCTGACCCAGTCACGTAGCGATAGCGGAGTGTATACTGGCTTA

Visualization of oriT structure

  oriT secondary structure

Predicted by RNAfold.

Download structure file


Host bacterium


ID   6240 GenBank   NZ_CP053757
Plasmid name   pMHMC-006 Incompatibility group   ColRNAI
Plasmid size   5219 bp Coordinate of oriT [Strand]   4501..4560 [-]
Host baterium   Shigella sonnei strain 506

Cargo genes


Drug resistance gene   -
Virulence gene   -
Metal resistance gene   -
Degradation gene   -
Symbiosis gene   -
Anti-CRISPR   -