Detailed information of oriT

oriT


The information of the oriT region


oriTDB ID   105763
Name   oriT_FDAARGOS_524|unnamed3 in_silico
Organism   Shigella sonnei strain FDAARGOS_524
Sequence Completeness      -
NCBI accession of oriT (coordinates [strand])   NZ_CP034069 (4640..4699 [+], 60 nt)
oriT length   60 nt
IRs (inverted repeats)     _
Location of nic site      _
Conserved sequence flanking the
  nic site  
 
 _
Note   Predicted by oriTfinder 2.0

  oriT sequence  


Download         Length: 60 nt

>oriT_FDAARGOS_524|unnamed3
GGGTGTCGGGGCGCAGCCCTGACCCAGTCACGTAGCGATAGCGGAGTGTATACTGGCTTA

Visualization of oriT structure

  oriT secondary structure

Predicted by RNAfold.

Download structure file


Host bacterium


ID   6200 GenBank   NZ_CP034069
Plasmid name   FDAARGOS_524|unnamed3 Incompatibility group   Col440I
Plasmid size   5034 bp Coordinate of oriT [Strand]   4640..4699 [+]
Host baterium   Shigella sonnei strain FDAARGOS_524

Cargo genes


Drug resistance gene   -
Virulence gene   -
Metal resistance gene   -
Degradation gene   -
Symbiosis gene   -
Anti-CRISPR   -