Detailed information of oriT

oriT

The information of the oriT region

• oriTDB ID: 105532
• Name: oriT_Bac57|unnamed
• Organism: Bacillus velezensis strain Bac57
• Sequence Completeness: -
• NCBI accession of oriT (coordinates [strand]): NZ_CP033053 (6768..6789 [+], 22 nt)
• oriT length: 22 nt
• IRs (inverted repeats): 1..6, 16..21 (CCCCCC..GGGGGG)
• Location of nic site: _
• Conserved sequence flanking the nic site: _
• Note: Predicted by oriTfinder 2.0

oriT sequence

• Length: 22 nt

>oriT_Bac57|unnamed
CCCCCCATGCTAACAGGGGGGT

oriT secondary structure

Predicted by RNAfold.

Relaxase

mobV_D9777_RS00030_Bac57|unnamed

• ID: 3773
• GenBank: WP_021494579
• Name: mobV_D9777_RS00030_Bac57|unnamed
• UniProt ID: _
• Length: 483 a.a.
• Note: Predicted by oriTfinder 2.0

Relaxase protein sequence

• Length: 483 a.a.
• Molecular weight: 56666.03 Da
• Isoelectric Point: 9.2236

>WP_021494579.1 MULTISPECIES: MobV family relaxase [Bacillus amyloliquefaciens group]
MANYAVVRMEKYKKDRLNGTQKHNQREFQKSKNENIDRGRSHLNYDLINGQPISYAQAVREKIEGRVKRK
VRDDAVLVSEFLITASPDYMNGLSETEQRRYFEVAVDHLKEKYTAENMLYATVHMDEATPHMHVGIVPIT
EDDRLSAKDFFNGKLKMKAIQDDFHRHMVKSGFDLERGEPSEKKHENVHQYKINQRKAELEQLNAEISLK
EKRKAELEQQNRAVESVISVKKEALTAKTQEPRIPTVESEKAGLFKKDKVTVPQHELENLYAYAEDQGKM
AAQLSQQLEAETEEKERWKSIAGEERERADSKDKMLSDLQATMNEEVEKAKRGMRRKLIKEFTEEQREEL
RQEVKEELSALKTENSELRTENRDLKRLTLSLSEQKDNEVKKHAETKKSLKAERGRYGELLNFAQEQNKE
FQSLNEENKTLKERVAVLEQWKDKMVQWAKEKLPRVRKLAASFFRTAGMPREANKYKDHELER

Protein domains

Predicted by InterproScan.

• Plasmid recombination enzyme (Mob_Pre) (1-192)

Protein structure

No available structure.

Host bacterium

• ID: 5970
• GenBank: NZ_CP033053
• Plasmid name: Bac57|unnamed
• Incompatibility group: Col
• Plasmid size: 8648 bp
• Coordinate of oriT [Strand]: 6768..6789 [+]
• Host baterium: Bacillus velezensis strain Bac57

Cargo genes

• Drug resistance gene: -
• Virulence gene: -
• Metal resistance gene: -
• Degradation gene: -
• Symbiosis gene: -
• Anti-CRISPR: -