Detailed information of oriT
oriT
The information of the oriT region
oriTDB ID | 105378 |
Name | oriT_p24362-3 |
Organism | Salmonella enterica subsp. enterica serovar Typhimurium strain CVM 24362 |
Sequence Completeness | - |
NCBI accession of oriT (coordinates [strand]) | NZ_CP051376 (1067..1126 [-], 60 nt) |
oriT length | 60 nt |
IRs (inverted repeats) | _ |
Location of nic site | _ |
Conserved sequence flanking the nic site |
_ |
Note | Predicted by oriTfinder 2.0 |
oriT sequence
Download Length: 60 nt
>oriT_p24362-3
GGGTGTCGGGGCGCAGCCCTGAACCAGTCACGTAGCGCTAGCGGAGTGTATACTGGCTTA
GGGTGTCGGGGCGCAGCCCTGAACCAGTCACGTAGCGCTAGCGGAGTGTATACTGGCTTA
Visualization of oriT structure
oriT secondary structure
Predicted by RNAfold.
Download structure fileHost bacterium
ID | 5816 | GenBank | NZ_CP051376 |
Plasmid name | p24362-3 | Incompatibility group | Col440I |
Plasmid size | 3829 bp | Coordinate of oriT [Strand] | 1067..1126 [-] |
Host baterium | Salmonella enterica subsp. enterica serovar Typhimurium strain CVM 24362 |
Cargo genes
Drug resistance gene | - |
Virulence gene | - |
Metal resistance gene | - |
Degradation gene | - |
Symbiosis gene | - |
Anti-CRISPR | - |