Detailed information of oriT
oriT
The information of the oriT region
oriTDB ID | 105325 |
Name | oriT_RHBSTW-00268|unnamed |
Organism | Klebsiella quasipneumoniae strain RHBSTW-00268 |
Sequence Completeness | - |
NCBI accession of oriT (coordinates [strand]) | NZ_CP055353 (226..283 [-], 58 nt) |
oriT length | 58 nt |
IRs (inverted repeats) | _ |
Location of nic site | _ |
Conserved sequence flanking the nic site |
_ |
Note | Predicted by oriTfinder 2.0 |
oriT sequence
Download Length: 58 nt
>oriT_RHBSTW-00268|unnamed
GGGTTTCGGGGCGCAGCCCTGAACCAGTCACGTAGCGCTAGCGGAGTGTATACTGGCT
GGGTTTCGGGGCGCAGCCCTGAACCAGTCACGTAGCGCTAGCGGAGTGTATACTGGCT
Visualization of oriT structure
oriT secondary structure
Predicted by RNAfold.
Download structure fileHost bacterium
ID | 5763 | GenBank | NZ_CP055353 |
Plasmid name | RHBSTW-00268|unnamed | Incompatibility group | - |
Plasmid size | 293 bp | Coordinate of oriT [Strand] | 226..283 [-] |
Host baterium | Klebsiella quasipneumoniae strain RHBSTW-00268 |
Cargo genes
Drug resistance gene | - |
Virulence gene | - |
Metal resistance gene | - |
Degradation gene | - |
Symbiosis gene | - |
Anti-CRISPR | - |