Detailed information of oriT

oriT


The information of the oriT region


oriTDB ID   105322
Name   oriT_pRHBSTW-00268_10 in_silico
Organism   Klebsiella quasipneumoniae strain RHBSTW-00268
Sequence Completeness      -
NCBI accession of oriT (coordinates [strand])   NZ_CP055339 (1999..2058 [+], 60 nt)
oriT length   60 nt
IRs (inverted repeats)     _
Location of nic site      _
Conserved sequence flanking the
  nic site  
 
 _
Note   Predicted by oriTfinder 2.0

  oriT sequence  


Download         Length: 60 nt

>oriT_pRHBSTW-00268_10
GGGTTTCGGGGCGCAGCCCTGAACCAGTCACGTAGCGCTAGCGGAGTGTATACTGGCTTA

Visualization of oriT structure

  oriT secondary structure

Predicted by RNAfold.

Download structure file


Host bacterium


ID   5760 GenBank   NZ_CP055339
Plasmid name   pRHBSTW-00268_10 Incompatibility group   Col440II
Plasmid size   3536 bp Coordinate of oriT [Strand]   1999..2058 [+]
Host baterium   Klebsiella quasipneumoniae strain RHBSTW-00268

Cargo genes


Drug resistance gene   -
Virulence gene   -
Metal resistance gene   -
Degradation gene   -
Symbiosis gene   -
Anti-CRISPR   -