Detailed information of oriT
oriT
The information of the oriT region
| oriTDB ID | 105029 |
| Name | oriT_p47733_COLMG828  |
| Organism | Klebsiella pneumoniae strain 47733 |
| Sequence Completeness | - |
| NCBI accession of oriT (coordinates [strand]) | NZ_CP050363 (408..480 [-], 73 nt) |
| oriT length | 73 nt |
| IRs (inverted repeats) | _ |
| Location of nic site | _ |
| Conserved sequence flanking the nic site |
_ |
| Note | Predicted by oriTfinder 2.0 |
oriT sequence
Download Length: 73 nt
>oriT_p47733_COLMG828
GTCGGGGTGAAGCCCTGACCAGGTGGGGAATGTCTGAGTGCGCGTGCGCGGTCCGACATTCCCACATCCTGTC
GTCGGGGTGAAGCCCTGACCAGGTGGGGAATGTCTGAGTGCGCGTGCGCGGTCCGACATTCCCACATCCTGTC
Visualization of oriT structure
oriT secondary structure
Predicted by RNAfold.
Download structure file
Host bacterium
| ID | 5467 | GenBank | NZ_CP050363 |
| Plasmid name | p47733_COLMG828 | Incompatibility group | Col |
| Plasmid size | 1546 bp | Coordinate of oriT [Strand] | 408..480 [-] |
| Host baterium | Klebsiella pneumoniae strain 47733 |
Cargo genes
| Drug resistance gene | - |
| Virulence gene | - |
| Metal resistance gene | - |
| Degradation gene | - |
| Symbiosis gene | - |
| Anti-CRISPR | - |