Detailed information of oriT

oriT

The information of the oriT region


oriTDB ID   104649
Name   oriT_AR_0029|unnamed in_silico
Organism   Proteus mirabilis strain AR_0029
Sequence Completeness      -
NCBI accession of oriT (coordinates [strand])   NZ_CP029726 (4496..4540 [-], 45 nt)
oriT length   45 nt
IRs (inverted repeats)      7..13, 25..31  (CGTTTCT..AGAAACG)
Location of nic site      _
Conserved sequence flanking the
  nic site    		  _
Note   Predicted by oriTfinder 2.0

  oriT sequence  


Download         Length: 45 nt

>oriT_AR_0029|unnamed
GCGCACCGTTTCTGAATGAAGTGAAGAAACGTCTAAGTGCGCCCT

Visualization of oriT structure

  oriT secondary structure

Predicted by RNAfold.

Download structure file


Relaxase

ID   3334 GenBank   WP_110706938
Name   MobA_MobL_AM356_RS18310_AR_0029|unnamed insolico UniProt ID   _
Length   371 a.a. PDB ID   
Note   Predicted by oriTfinder 2.0

  Relaxase protein sequence


Download         Length: 371 a.a.        Molecular weight: 43191.13 Da        Isoelectric Point: 7.4035

>WP_110706938.1 MobA/MobL family protein [Proteus mirabilis]
MASYHLSVKTGGKGKAASHAVYIAREGKYAREKDNDLEHQESGNMPAWAAHKPTEFWKAADTFERANGCT
YREIEIALPRELKPEQRLELVRDFVRQEIGDRHAYQFAIHNPRAAIEGGEQPHAHIMFSERLNDGIERDP
QLYFKRANTKKPERGGAKKVRFGETPTERKAYLIAQRERWADLQNKHLERYQHPDRVDARSLKAQGIERE
PERHFGAGPVRQFEPAQLHALMERREAERQAQHCRDECNSVIDVTTTLREALSERDNLTLKHEQTSEPQS
KATSDKAFDFEKESEKLTPLVNDALSEIQDEIDLQSLINDSMAEFQNIHQELVRQQARERLAEKQRQQEK
ERQRLAEQKRQKPDKGWSFSR

  Protein domains


Predicted by InterproScan.

MobA/MobL family (MobA_MobL)

(42-217)


  Protein structure



No available structure.




Host bacterium

ID   5088 GenBank   NZ_CP029726
Plasmid name   AR_0029|unnamed Incompatibility group   ColE10
Plasmid size   10024 bp Coordinate of oriT [Strand]   4496..4540 [-]
Host baterium   Proteus mirabilis strain AR_0029

Cargo genes

Drug resistance gene   -
Virulence gene   -
Metal resistance gene   -
Degradation gene   -
Symbiosis gene   -
Anti-CRISPR   -