Detailed information of oriT
oriT
The information of the oriT region
| oriTDB ID | 104198 |
| Name | oriT_2020CK-00211|unnamed4  |
| Organism | Klebsiella grimontii strain 2020CK-00211 |
| Sequence Completeness | - |
| NCBI accession of oriT (coordinates [strand]) | NZ_CP118193 (2223..2272 [+], 50 nt) |
| oriT length | 50 nt |
| IRs (inverted repeats) | 5..12, 15..22 (GCAAAATT..AATTTTGC) |
| Location of nic site | _ |
| Conserved sequence flanking the nic site |
_ |
| Note | Predicted by oriTfinder 2.0 |
oriT sequence
Download Length: 50 nt
>oriT_2020CK-00211|unnamed4
ATCTGCAAAATTTTAATTTTGCGTGGGGTGTGGGTATTTTTCGTGGTGAG
ATCTGCAAAATTTTAATTTTGCGTGGGGTGTGGGTATTTTTCGTGGTGAG
Visualization of oriT structure
oriT secondary structure
Predicted by RNAfold.
Download structure file
Host bacterium
| ID | 4637 | GenBank | NZ_CP118193 |
| Plasmid name | 2020CK-00211|unnamed4 | Incompatibility group | Col440I |
| Plasmid size | 3674 bp | Coordinate of oriT [Strand] | 2223..2272 [+] |
| Host baterium | Klebsiella grimontii strain 2020CK-00211 |
Cargo genes
| Drug resistance gene | - |
| Virulence gene | - |
| Metal resistance gene | - |
| Degradation gene | - |
| Symbiosis gene | - |
| Anti-CRISPR | - |