Detailed information of oriT
oriT
The information of the oriT region
oriTDB ID | 104104 |
Name | oriT_pEA13_8 |
Organism | Escherichia albertii strain BIA_13 |
Sequence Completeness | - |
NCBI accession of oriT (coordinates [strand]) | NZ_CP117667 (231..318 [+], 88 nt) |
oriT length | 88 nt |
IRs (inverted repeats) | _ |
Location of nic site | _ |
Conserved sequence flanking the nic site |
_ |
Note | Predicted by oriTfinder 2.0 |
oriT sequence
Download Length: 88 nt
>oriT_pEA13_8
GGTGTCGGGGTGAAGCCCTGACCAGATAGGCAATTGTGATAGTGTCGCGGGTGACGGTATTACATTTGCACATCCTGTCCCGATTTTT
GGTGTCGGGGTGAAGCCCTGACCAGATAGGCAATTGTGATAGTGTCGCGGGTGACGGTATTACATTTGCACATCCTGTCCCGATTTTT
Visualization of oriT structure
oriT secondary structure
Predicted by RNAfold.
Download structure fileHost bacterium
ID | 4543 | GenBank | NZ_CP117667 |
Plasmid name | pEA13_8 | Incompatibility group | - |
Plasmid size | 1589 bp | Coordinate of oriT [Strand] | 231..318 [+] |
Host baterium | Escherichia albertii strain BIA_13 |
Cargo genes
Drug resistance gene | - |
Virulence gene | - |
Metal resistance gene | - |
Degradation gene | - |
Symbiosis gene | - |
Anti-CRISPR | - |