Detailed information of oriT
oriT
The information of the oriT region
oriTDB ID | 103916 |
Name | oriT_p14-7355.2 |
Organism | Salmonella enterica subsp. enterica serovar 14[5]12:i:- strain PNCS014873 |
Sequence Completeness | - |
NCBI accession of oriT (coordinates [strand]) | NZ_CP039609 (2479..2535 [-], 57 nt) |
oriT length | 57 nt |
IRs (inverted repeats) | _ |
Location of nic site | _ |
Conserved sequence flanking the nic site |
_ |
Note | Predicted by oriTfinder 2.0 |
oriT sequence
Download Length: 57 nt
>oriT_p14-7355.2
GGTTTCGGGGCGCAGCCCTGAACCAGTCACGTAGCGCTAGCGGAGTGTATACTGGCT
GGTTTCGGGGCGCAGCCCTGAACCAGTCACGTAGCGCTAGCGGAGTGTATACTGGCT
Visualization of oriT structure
oriT secondary structure
Predicted by RNAfold.
Download structure fileHost bacterium
ID | 4356 | GenBank | NZ_CP039609 |
Plasmid name | p14-7355.2 | Incompatibility group | Col440I |
Plasmid size | 2699 bp | Coordinate of oriT [Strand] | 2479..2535 [-] |
Host baterium | Salmonella enterica subsp. enterica serovar 14[5]12:i:- strain PNCS014873 |
Cargo genes
Drug resistance gene | - |
Virulence gene | - |
Metal resistance gene | - |
Degradation gene | - |
Symbiosis gene | - |
Anti-CRISPR | - |