Detailed information of oriT
oriT
The information of the oriT region
| oriTDB ID | 102941 |
| Name | oriT_p13C1065T-4  |
| Organism | Escherichia coli strain 13C1065T |
| Sequence Completeness | - |
| NCBI accession of oriT (coordinates [strand]) | NZ_CP019263 (1421..1703 [+], 283 nt) |
| oriT length | 283 nt |
| IRs (inverted repeats) | _ |
| Location of nic site | _ |
| Conserved sequence flanking the nic site |
_ |
| Note | Predicted by oriTfinder 2.0 |
oriT sequence
Download Length: 283 nt
>oriT_p13C1065T-4
GGTTATTGCTGCTTTCTGCCGATAACAGTGCAAGTTTTGCGATTTTTTTAAGCGCTTCACAGTTCGTTAGCAAGCTCAGTTTTTTTGATAAAATTCTGGTCAGTTTGTTTAAAAAGTGTTACAGTAAGGCGAATGGTTGAATGGTTAGTTTTAAGACTCAAATCGGCAGTATTAAAATTCCAAAAGTAGCTTTTCATACTTCAAAAAACCAAACTTTAATTTCATGTAGAAGAGTTGTACTATTGTATTGACTCAAGGACAATCCGACATGTCAGAATCAGAT
GGTTATTGCTGCTTTCTGCCGATAACAGTGCAAGTTTTGCGATTTTTTTAAGCGCTTCACAGTTCGTTAGCAAGCTCAGTTTTTTTGATAAAATTCTGGTCAGTTTGTTTAAAAAGTGTTACAGTAAGGCGAATGGTTGAATGGTTAGTTTTAAGACTCAAATCGGCAGTATTAAAATTCCAAAAGTAGCTTTTCATACTTCAAAAAACCAAACTTTAATTTCATGTAGAAGAGTTGTACTATTGTATTGACTCAAGGACAATCCGACATGTCAGAATCAGAT
Visualization of oriT structure
oriT secondary structure
Predicted by RNAfold.
Download structure file
Host bacterium
| ID | 3384 | GenBank | NZ_CP019263 |
| Plasmid name | p13C1065T-4 | Incompatibility group | - |
| Plasmid size | 24727 bp | Coordinate of oriT [Strand] | 1421..1703 [+] |
| Host baterium | Escherichia coli strain 13C1065T |
Cargo genes
| Drug resistance gene | - |
| Virulence gene | - |
| Metal resistance gene | - |
| Degradation gene | - |
| Symbiosis gene | - |
| Anti-CRISPR | - |