Detailed information of oriT
oriT
The information of the oriT region
oriTDB ID | 102671 |
Name | oriT_p1233_2 |
Organism | Escherichia coli O55:H7 str. TB182A |
Sequence Completeness | - |
NCBI accession of oriT (coordinates [strand]) | NZ_AOTA01000005 (5197..5256 [+], 60 nt) |
oriT length | 60 nt |
IRs (inverted repeats) | _ |
Location of nic site | _ |
Conserved sequence flanking the nic site |
_ |
Note | Predicted by oriTfinder 2.0 |
oriT sequence
Download Length: 60 nt
>oriT_p1233_2
GGGTTTCGGGGCGCAGCCCTGAACCAGTCATGTAGCGCTAGCGGAGTGTATACTGGCTTA
GGGTTTCGGGGCGCAGCCCTGAACCAGTCATGTAGCGCTAGCGGAGTGTATACTGGCTTA
Visualization of oriT structure
oriT secondary structure
Predicted by RNAfold.
Download structure fileHost bacterium
ID | 3115 | GenBank | NZ_AOTA01000005 |
Plasmid name | p1233_2 | Incompatibility group | ColRNAI |
Plasmid size | 6211 bp | Coordinate of oriT [Strand] | 5197..5256 [+] |
Host baterium | Escherichia coli O55:H7 str. TB182A |
Cargo genes
Drug resistance gene | sul2, aph(3'')-Ib, aph(6)-Id |
Virulence gene | - |
Metal resistance gene | - |
Degradation gene | - |
Symbiosis gene | - |
Anti-CRISPR | - |