Detailed information of oriT
oriT
The information of the oriT region
| oriTDB ID | 102596 |
| Name | oriT_INSRALV892|unnamed  |
| Organism | Morganella morganii strain INSRALV892 |
| Sequence Completeness | - |
| NCBI accession of oriT (coordinates [strand]) | NZ_LGYC01000043 (723..826 [-], 104 nt) |
| oriT length | 104 nt |
| IRs (inverted repeats) | 63..70, 73..80 (CACCATGC..GCATGGTG) |
| Location of nic site | _ |
| Conserved sequence flanking the nic site |
_ |
| Note | Predicted by oriTfinder 2.0 |
oriT sequence
Download Length: 104 nt
>oriT_INSRALV892|unnamed
GCCCCGCAGGGCAGGATTCCCGTTGAGCGCCGCAGGTGCGAATAAGGGGAAGTGAAGAGGAACACCATGCTTGCATGGTGGGCCTACTTCACACATCCTGCCCG
GCCCCGCAGGGCAGGATTCCCGTTGAGCGCCGCAGGTGCGAATAAGGGGAAGTGAAGAGGAACACCATGCTTGCATGGTGGGCCTACTTCACACATCCTGCCCG
Visualization of oriT structure
oriT secondary structure
Predicted by RNAfold.
Download structure file
Host bacterium
| ID | 3040 | GenBank | NZ_LGYC01000043 |
| Plasmid name | INSRALV892|unnamed | Incompatibility group | - |
| Plasmid size | 8575 bp | Coordinate of oriT [Strand] | 723..826 [-] |
| Host baterium | Morganella morganii strain INSRALV892 |
Cargo genes
| Drug resistance gene | tet(Y), aph(6)-Id, aph(3'')-Ib |
| Virulence gene | - |
| Metal resistance gene | - |
| Degradation gene | - |
| Symbiosis gene | - |
| Anti-CRISPR | - |