Detailed information of oriT
oriT
The information of the oriT region
| oriTDB ID | 102461 |
| Name | oriT_145|unnamed98  |
| Organism | Klebsiella pneumoniae strain 145 |
| Sequence Completeness | - |
| NCBI accession of oriT (coordinates [strand]) | NZ_MAOO01000173 (118..166 [+], 49 nt) |
| oriT length | 49 nt |
| IRs (inverted repeats) | _ |
| Location of nic site | 32..33 |
| Conserved sequence flanking the nic site |
GGTGTGGTGA |
| Note | Predicted by oriTfinder 2.0 |
oriT sequence
Download Length: 49 nt
>oriT_145|unnamed98
AATCTGCAAAATTTTAATTYTGCGTGGGGTGTGGTGATTTTGTGGTGAG
AATCTGCAAAATTTTAATTYTGCGTGGGGTGTGGTGATTTTGTGGTGAG
Visualization of oriT structure
oriT secondary structure
Predicted by RNAfold.
Download structure file
Host bacterium
| ID | 2905 | GenBank | NZ_MAOO01000173 |
| Plasmid name | 145|unnamed98 | Incompatibility group | - |
| Plasmid size | 1049 bp | Coordinate of oriT [Strand] | 118..166 [+] |
| Host baterium | Klebsiella pneumoniae strain 145 |
Cargo genes
| Drug resistance gene | - |
| Virulence gene | - |
| Metal resistance gene | - |
| Degradation gene | - |
| Symbiosis gene | - |
| Anti-CRISPR | - |