Detailed information of oriT
oriT
The information of the oriT region
| oriTDB ID | 102123 |
| Name | oriT_ARPG-372|unnamed40  |
| Organism | Klebsiella pneumoniae strain ARPG-372 |
| Sequence Completeness | - |
| NCBI accession of oriT (coordinates [strand]) | NZ_NBOL01000090 (309..359 [-], 51 nt) |
| oriT length | 51 nt |
| IRs (inverted repeats) | 6..13, 16..23 (GCAAAATT..AATTTTGC) |
| Location of nic site | _ |
| Conserved sequence flanking the nic site |
_ |
| Note | Predicted by oriTfinder 2.0 |
oriT sequence
Download Length: 51 nt
>oriT_ARPG-372|unnamed40
AATCTGCAAAATTTTAATTTTGCGTGGGGTGTGGGTATTTTTAGTGGTGAG
AATCTGCAAAATTTTAATTTTGCGTGGGGTGTGGGTATTTTTAGTGGTGAG
Visualization of oriT structure
oriT secondary structure
Predicted by RNAfold.
Download structure file
Host bacterium
| ID | 2567 | GenBank | NZ_NBOL01000090 |
| Plasmid name | ARPG-372|unnamed40 | Incompatibility group | - |
| Plasmid size | 556 bp | Coordinate of oriT [Strand] | 309..359 [-] |
| Host baterium | Klebsiella pneumoniae strain ARPG-372 |
Cargo genes
| Drug resistance gene | - |
| Virulence gene | - |
| Metal resistance gene | - |
| Degradation gene | - |
| Symbiosis gene | - |
| Anti-CRISPR | - |